Strain Fitness in Escherichia coli BL21 around ECD_01457

Experiment: Mixed culture, Bdellovibrio bacteriovorus HD100_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01456 and ECD_01457 are separated by 401 nucleotidesECD_01457 and ECD_01458 are separated by 74 nucleotidesECD_01458 and ECD_01459 are separated by 247 nucleotides ECD_01456: ECD_01456 - putative Ser-type periplasmic non-aryl sulfatase, at 1,536,323 to 1,538,005 _01456 ECD_01457: ECD_01457 - UV-inducible global regulator, EvgA-, GadE-dependent, at 1,538,407 to 1,539,168 _01457 ECD_01458: ECD_01458 - two-component system connector membrane protein, EvgSA to PhoQP, at 1,539,243 to 1,539,440 _01458 ECD_01459: ECD_01459 - putative oxidoreductase, at 1,539,688 to 1,541,967 _01459 Position (kb) 1538 1539 1540Strain fitness (log2 ratio) -1 0 1 2 3 4at 1539.886 kb on - strandat 1539.995 kb on + strand, within ECD_01459at 1540.047 kb on + strand, within ECD_01459

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus HD100_1
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1,539,886 - +2.8
1,539,995 + ECD_01459 0.13 +0.1
1,540,047 + ECD_01459 0.16 +4.3

Or see this region's nucleotide sequence