Strain Fitness in Pseudomonas putida KT2440 around PP_1255

Experiment: limonene 10 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	limonene 10 vol%
1,432,137	-		PP_1254	0.20	-0.5
1,432,444	+		PP_1254	0.48	-0.5
1,432,445	-		PP_1254	0.48	+0.4
1,432,467	+		PP_1254	0.50	-0.5
1,432,468	-		PP_1254	0.50	+0.0
1,432,926	+				-0.4
1,432,927	-				+0.1
1,432,927	-				+0.1
1,432,927	-				+0.1
1,432,984	-				+0.4
1,433,084	+				+0.8
1,433,138	-				-1.0
1,433,155	+				-1.0
1,433,691	+		PP_1255	0.44	-0.0
1,433,691	+		PP_1255	0.44	-1.1
1,433,817	+		PP_1255	0.55	+0.6
1,434,214	-		PP_1255	0.86	-1.0
1,434,481	-				+0.4
1,434,481	-				+0.2
1,434,619	+		PP_1256	0.15	+0.6
1,434,620	-		PP_1256	0.15	-2.3
1,435,265	-		PP_1256	0.56	-0.1
1,435,265	-		PP_1256	0.56	+0.2