Strain Fitness in Escherichia coli BW25113 around b4675

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
1,876,009	+	yeaP	b1794	0.26	-0.6
1,876,093	+	yeaP	b1794	0.35	-0.5
1,876,241	-	yeaP	b1794	0.49	-0.3
1,876,257	+	yeaP	b1794	0.50	+1.3
1,876,257	+	yeaP	b1794	0.50	+0.2
1,876,257	+	yeaP	b1794	0.50	+0.5
1,876,257	+	yeaP	b1794	0.50	+1.2
1,876,257	+	yeaP	b1794	0.50	+0.5
1,876,347	+	yeaP	b1794	0.59	-0.1
1,876,361	-	yeaP	b1794	0.61	+0.3
1,876,377	+	yeaP	b1794	0.62	-2.1
1,876,377	+	yeaP	b1794	0.62	+0.7
1,876,421	-	yeaP	b1794	0.66	+1.5
1,876,421	-	yeaP	b1794	0.66	-1.0
1,876,452	+	yeaP	b1794	0.69	-0.4
1,876,480	+	yeaP	b1794	0.72	+1.1
1,876,506	+	yeaP	b1794	0.75	+0.2
1,876,616	+	yeaP	b1794	0.85	+1.2
1,876,639	+	yeaP	b1794	0.88	-0.3
1,876,639	+	yeaP	b1794	0.88	-0.5
1,876,668	+				-0.2
1,876,678	-				+1.5
1,876,707	+				-2.3
1,876,753	+				-0.6
1,876,753	+				-0.7
1,876,753	+				+0.1
1,876,770	+				-1.7
1,876,879	-	yoaK	b4676	0.83	+2.5
1,876,879	-	yoaK	b4676	0.83	+2.5
1,876,889	-				-0.3
1,876,889	-				-0.1
1,876,945	+	yoaJ	b4675	0.63	-1.1
1,876,945	+	yoaJ	b4675	0.63	-1.0
1,876,955	+	yoaJ	b4675	0.76	-0.8
1,876,963	-	yoaJ	b4675	0.87	+0.5
1,876,963	-	yoaJ	b4675	0.87	+0.5
1,877,005	+				+0.9
1,877,014	-				+0.3
1,877,035	+				+0.5
1,877,135	-	yeaQ	b1795	0.42	-0.4
1,877,137	+	yeaQ	b1795	0.43	-0.1
1,877,145	-	yeaQ	b1795	0.46	+0.9
1,877,145	-	yeaQ	b1795	0.46	-0.5
1,877,174	-	yeaQ	b1795	0.57	+0.5
1,877,175	-	yeaQ	b1795	0.58	+0.4
1,877,260	+				+0.3
1,877,433	+				-1.7
1,877,476	+	yoaG	b1796	0.27	-0.6
1,877,476	+	yoaG	b1796	0.27	+0.2
1,877,484	-	yoaG	b1796	0.31	-0.1
1,877,513	-	yoaG	b1796	0.47	-0.8
1,877,571	-	yoaG	b1796	0.79	-2.1
1,877,602	-				-1.2
1,877,658	-	yeaR	b1797	0.12	-0.1
1,877,663	+	yeaR	b1797	0.14	+0.3
1,877,663	+	yeaR	b1797	0.14	+0.3
1,877,714	+	yeaR	b1797	0.28	+0.1
1,877,715	-	yeaR	b1797	0.28	-1.1
1,877,764	+	yeaR	b1797	0.42	+0.1
1,877,765	+	yeaR	b1797	0.42	-1.5
1,877,765	+	yeaR	b1797	0.42	-0.5
1,877,791	+	yeaR	b1797	0.49	-1.1
1,877,804	-	yeaR	b1797	0.53	-0.1
1,877,804	-	yeaR	b1797	0.53	+0.2
1,877,804	-	yeaR	b1797	0.53	-1.9
1,877,814	-	yeaR	b1797	0.56	+2.5
1,877,859	-	yeaR	b1797	0.68	+0.5