Strain Fitness in Escherichia coli BW25113 around b1927

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
2,003,414	+	fliS	b1925	0.21	-0.2
2,003,451	-	fliS	b1925	0.30	-0.9
2,003,451	-	fliS	b1925	0.30	+1.0
2,003,451	-	fliS	b1925	0.30	-0.1
2,003,462	+	fliS	b1925	0.33	+0.0
2,003,544	+	fliS	b1925	0.53	+0.0
2,003,544	+	fliS	b1925	0.53	-1.2
2,003,699	+				-0.8
2,003,734	+				-1.0
2,003,735	-				+1.0
2,003,738	-				+1.2
2,003,923	-	fliT	b1926	0.51	+1.1
2,003,933	-	fliT	b1926	0.54	-1.2
2,004,035	+	fliT	b1926	0.81	-0.1
2,004,073	+				+0.1
2,004,135	+				-2.3
2,004,148	+				-1.7
2,004,241	+				-0.5
2,004,241	+				+0.5
2,004,249	-				-0.1
2,004,249	-				+0.6
2,004,249	-				+0.3
2,004,299	+				+1.1
2,004,446	+	amyA	b1927	0.18	+0.3
2,004,461	-	amyA	b1927	0.19	-0.2
2,004,533	+	amyA	b1927	0.24	-0.9
2,004,543	-	amyA	b1927	0.24	+0.6
2,004,614	-	amyA	b1927	0.29	-2.3
2,004,614	-	amyA	b1927	0.29	+0.0
2,004,739	-	amyA	b1927	0.38	-1.8
2,004,809	+	amyA	b1927	0.42	-0.7
2,004,861	-	amyA	b1927	0.46	+0.3
2,004,942	-	amyA	b1927	0.51	+0.4
2,005,017	-	amyA	b1927	0.56	+0.3
2,005,185	+	amyA	b1927	0.68	-1.4
2,005,185	+	amyA	b1927	0.68	-1.3
2,005,308	+	amyA	b1927	0.76	-1.3
2,005,308	+	amyA	b1927	0.76	-1.2
2,005,310	+	amyA	b1927	0.76	+0.7
2,005,410	-	amyA	b1927	0.83	-0.8
2,005,410	-	amyA	b1927	0.83	+2.6
2,005,443	-	amyA	b1927	0.85	-0.9
2,005,591	-				+0.6
2,005,633	+				-0.3
2,005,633	+				-1.2
2,005,659	-				+1.0
2,005,659	-				-0.6
2,005,729	+				+0.3
2,005,787	-	yedD	b1928	0.21	-0.7
2,005,788	+	yedD	b1928	0.21	-0.5
2,005,801	-	yedD	b1928	0.24	-0.2
2,005,801	-	yedD	b1928	0.24	-0.7
2,005,809	-	yedD	b1928	0.26	-1.8
2,005,827	-	yedD	b1928	0.30	-0.4
2,005,953	+	yedD	b1928	0.61	-1.9
2,005,969	-	yedD	b1928	0.65	+0.3
2,006,256	-				-0.9
2,006,284	+				+1.5
2,006,393	-				-0.3
2,006,393	-				+0.9
2,006,417	+				+0.1
2,006,417	+				-0.3
2,006,457	-	yedE	b1929	0.13	-0.4
2,006,508	+	yedE	b1929	0.17	-1.0
2,006,605	-	yedE	b1929	0.25	-0.5