Strain Fitness in Escherichia coli BW25113 around b0964

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
1,025,399	+	helD	b0962	0.83	-1.5
1,025,424	+	helD	b0962	0.84	+0.2
1,025,424	+	helD	b0962	0.84	-1.1
1,025,661	+				-0.2
1,025,662	+				-0.7
1,025,669	-				-3.5
1,025,772	+				-0.8
1,025,827	-	mgsA	b0963	0.10	-0.1
1,025,893	-	mgsA	b0963	0.25	-1.8
1,025,921	+	mgsA	b0963	0.31	+0.5
1,025,943	-	mgsA	b0963	0.36	-1.6
1,025,943	-	mgsA	b0963	0.36	+0.6
1,026,042	-	mgsA	b0963	0.57	-0.9
1,026,043	-				+0.3
1,026,054	+	mgsA	b0963	0.60	-1.2
1,026,115	+	mgsA	b0963	0.73	-0.5
1,026,116	-	mgsA	b0963	0.73	+0.4
1,026,119	+	mgsA	b0963	0.74	-1.2
1,026,123	-	mgsA	b0963	0.75	-0.7
1,026,153	+	mgsA	b0963	0.81	+0.2
1,026,153	+	mgsA	b0963	0.81	+0.1
1,026,295	+				-0.2
1,026,403	-	yccT	b0964	0.10	+0.2
1,026,403	-	yccT	b0964	0.10	+0.7
1,026,627	+	yccT	b0964	0.44	+0.6
1,026,627	+				+3.6
1,026,685	+	yccT	b0964	0.53	-0.7
1,026,740	+	yccT	b0964	0.61	-1.4
1,026,740	+	yccT	b0964	0.61	-1.0
1,026,804	+	yccT	b0964	0.71	+0.0
1,026,824	-	yccT	b0964	0.74	-0.4
1,026,824	-	yccT	b0964	0.74	-0.4
1,026,958	+				-0.8
1,026,985	+				+0.0
1,026,985	+				+0.4
1,026,992	+				-0.1
1,027,060	+				+0.8
1,027,060	+				-1.1
1,027,085	+				-0.0
1,027,145	+				-1.1
1,027,153	-				-0.0
1,027,293	-	b0965	b0965	0.30	+0.5
1,027,466	+	b0965	b0965	0.72	+1.0
1,027,570	-				+0.3
1,027,626	-				+0.5
1,027,633	-				+3.4
1,027,658	-				-1.0
1,027,667	+	hspQ	b0966	0.13	+2.1
1,027,674	-	hspQ	b0966	0.15	-0.3
1,027,675	-	hspQ	b0966	0.15	+0.3
1,027,695	+	hspQ	b0966	0.21	-0.7
1,027,747	+	hspQ	b0966	0.38	+2.6
1,027,747	+	hspQ	b0966	0.38	-2.5
1,027,755	-	hspQ	b0966	0.40	+0.2
1,027,810	-	hspQ	b0966	0.58	-0.3
1,027,810	-	hspQ	b0966	0.58	-0.3
1,027,865	-	hspQ	b0966	0.75	-0.6
1,027,865	-	hspQ	b0966	0.75	-0.3
1,027,885	+	hspQ	b0966	0.81	+1.6