Strain Fitness in Escherichia coli BW25113 around b4463

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
2,894,999	-	ygcS	b2771	0.33	-0.3
2,895,130	-	ygcS	b2771	0.43	-0.4
2,895,187	+	ygcS	b2771	0.47	+1.2
2,895,187	+	ygcS	b2771	0.47	-0.6
2,895,442	-	ygcS	b2771	0.66	-1.1
2,895,535	-	ygcS	b2771	0.73	-2.1
2,895,559	+	ygcS	b2771	0.75	+0.8
2,895,692	-	ygcS	b2771	0.85	+1.8
2,895,721	+	ygcS	b2771	0.87	+0.2
2,895,770	+				-0.7
2,895,803	+				-0.5
2,895,906	-				-0.6
2,896,019	-				+0.1
2,896,053	+				+1.2
2,896,053	+				-0.5
2,896,084	-				-0.8
2,896,170	+	ygcU	b4463	0.13	+0.5
2,896,305	-	ygcU	b4463	0.22	+0.7
2,896,357	-	ygcU	b4463	0.25	-0.4
2,896,357	-	ygcU	b4463	0.25	-0.1
2,896,423	+	ygcU	b4463	0.30	+0.3
2,896,423	+	ygcU	b4463	0.30	-0.2
2,896,531	-	ygcU	b4463	0.37	+0.6
2,896,652	-	ygcU	b4463	0.46	+0.6
2,896,732	-	ygcU	b4463	0.51	-1.1
2,896,825	-	ygcU	b4463	0.58	+0.5
2,896,905	-	ygcU	b4463	0.63	+0.1
2,896,905	-	ygcU	b4463	0.63	+1.0
2,896,944	+	ygcU	b4463	0.66	+0.2
2,896,944	+	ygcU	b4463	0.66	-1.8
2,896,954	-	ygcU	b4463	0.67	-0.2
2,897,059	-	ygcU	b4463	0.74	-1.9
2,897,070	+	ygcU	b4463	0.75	+1.1
2,897,078	-	ygcU	b4463	0.75	-0.6
2,897,078	-	ygcU	b4463	0.75	-2.3
2,897,156	+	ygcU	b4463	0.80	-0.3
2,897,156	+	ygcU	b4463	0.80	-1.2
2,897,164	-	ygcU	b4463	0.81	+0.6
2,897,211	-	ygcU	b4463	0.84	+1.1
2,897,219	-	ygcU	b4463	0.85	+1.2
2,897,219	-	ygcU	b4463	0.85	+0.2
2,897,259	-	ygcU	b4463	0.87	+0.7
2,897,354	+				+1.2
2,897,364	+				+1.1
2,897,364	+				+0.5
2,897,582	+				+1.2
2,897,582	+				+2.8
2,897,582	+				+2.8
2,897,582	+				+2.8
2,897,768	-	ygcW	b2774	0.33	+0.8
2,897,768	-	ygcW	b2774	0.33	+1.2
2,897,777	-	ygcW	b2774	0.34	-0.5
2,897,813	-	ygcW	b2774	0.39	+2.8
2,897,813	-	ygcW	b2774	0.39	+0.2
2,897,899	-	ygcW	b2774	0.49	+1.2
2,897,928	-	ygcW	b2774	0.53	+1.8
2,897,946	-	ygcW	b2774	0.55	+2.8
2,897,955	-	ygcW	b2774	0.57	+2.8
2,897,975	-	ygcW	b2774	0.59	+1.5
2,897,985	-	ygcW	b2774	0.60	+2.8
2,898,013	-	ygcW	b2774	0.64	+2.8
2,898,013	-	ygcW	b2774	0.64	+0.5
2,898,023	-	ygcW	b2774	0.65	-0.7
2,898,026	+	ygcW	b2774	0.66	+1.2
2,898,069	-	ygcW	b2774	0.71	+1.8
2,898,071	+	ygcW	b2774	0.71	+0.8
2,898,072	+	ygcW	b2774	0.72	+1.2
2,898,072	+	ygcW	b2774	0.72	+0.5
2,898,090	-	ygcW	b2774	0.74	+2.8
2,898,090	-	ygcW	b2774	0.74	+1.2
2,898,174	+	ygcW	b2774	0.84	-0.4
2,898,185	+	ygcW	b2774	0.86	+0.4
2,898,191	+	ygcW	b2774	0.87	-0.2
2,898,197	+	ygcW	b2774	0.87	-1.1
2,898,200	-	ygcW	b2774	0.88	+2.8
2,898,272	+				+1.8
2,898,291	+				+0.8
2,898,292	+				-0.2
2,898,292	+				+0.8
2,898,292	+				+0.8
2,898,292	+				+0.1
2,898,365	-				+0.2
2,898,384	-				+0.2
2,898,384	-				+1.0
2,898,402	-				-0.7
2,898,402	-				+0.2
2,898,413	+				+1.8
2,898,424	+				+1.8
2,898,430	+				-1.8
2,898,432	-				+0.8
2,898,434	+				-1.3
2,898,434	+				+0.1