Strain Fitness in Escherichia coli BW25113 around b1316

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
1,375,200	+	ycjS	b1315	0.33	-0.1
1,375,420	+	ycjS	b1315	0.53	-0.1
1,375,426	-	ycjS	b1315	0.54	-0.4
1,375,566	+	ycjS	b1315	0.67	+0.3
1,375,566	+	ycjS	b1315	0.67	+0.3
1,375,566	+	ycjS	b1315	0.67	+0.2
1,375,701	+	ycjS	b1315	0.80	-0.6
1,375,709	-	ycjS	b1315	0.81	+1.5
1,375,709	-	ycjS	b1315	0.81	-0.2
1,375,842	-				+0.1
1,375,872	+				-2.3
1,375,872	+				-0.7
1,375,985	+				+1.4
1,375,985	+				+0.6
1,376,172	+	ycjT	b1316	0.12	+0.0
1,376,392	-	ycjT	b1316	0.21	-0.7
1,376,562	-	ycjT	b1316	0.29	-0.2
1,376,589	-	ycjT	b1316	0.30	-0.3
1,376,589	-	ycjT	b1316	0.30	+0.1
1,377,174	-	ycjT	b1316	0.56	-0.6
1,377,634	+	ycjT	b1316	0.76	-0.3
1,377,666	-	ycjT	b1316	0.78	+0.3
1,377,676	-	ycjT	b1316	0.78	-0.9
1,377,844	+	ycjT	b1316	0.85	+0.4
1,377,850	-	ycjT	b1316	0.86	+0.8
1,377,854	+	ycjT	b1316	0.86	-0.7
1,377,967	+				-0.6
1,378,082	+				-0.2
1,378,082	+				+0.7
1,378,093	+				-0.1
1,378,093	+				-0.1
1,378,273	-	ycjU	b1317	0.15	-0.2
1,378,326	-	ycjU	b1317	0.23	+0.5
1,378,659	-	ycjU	b1317	0.74	-1.3
1,378,707	+	ycjU	b1317	0.81	-0.4
1,378,711	-	ycjU	b1317	0.82	+1.0
1,378,887	+				-0.3