Strain Fitness in Escherichia coli BW25113 around b0559

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
578,159	-				-1.0
578,176	+				+1.3
578,241	-				+2.7
578,270	+				+2.7
578,276	-				+2.7
578,280	+				+1.7
578,283	-				+1.7
578,283	-				+2.7
578,283	-				+1.7
578,289	-				+2.7
578,297	-				+2.7
578,299	-				+2.7
578,302	+				-1.0
578,302	+				-1.2
578,314	+				+2.7
578,334	+				+0.1
578,336	+				+2.7
578,337	-				+1.4
578,337	-				+2.7
578,351	-				+0.7
578,356	-				+2.7
578,356	-				+1.7
578,364	-				+1.7
578,366	-				+0.3
578,377	+				+2.7
578,378	-				+0.8
578,378	-				+1.1
578,383	-				-1.0
578,383	-				+2.1
578,383	-				+2.7
578,394	-				+2.7
578,395	-				+1.1
578,395	-				+1.1
578,408	-				+1.7
578,410	-				+2.7
578,410	-				+2.7
578,429	-				+2.7
578,581	+	ybcV	b0558	0.42	+2.7
578,916	+				+2.7
578,972	-				+2.7
578,985	+				+1.7
579,007	+				+2.7
579,008	+				+2.7
579,008	+				+2.7
579,008	+				+1.1
579,008	+				+2.7
579,012	+				+1.1
579,012	+				+2.7
579,013	+				+2.7
579,015	-				+1.1
579,015	-				+2.7
579,015	-				+1.4
579,015	-				-0.6
579,017	+				+1.7
579,017	+				+1.7
579,017	+				+2.7
579,025	+				+1.7
579,025	+				+0.7
579,027	-				+0.1
579,027	-				+1.1
579,027	-				+0.9
579,035	-				+0.1
579,044	+				+2.7
579,081	-				+0.5
579,083	-				+2.7
579,085	+				+2.7
579,086	+				+0.3
579,093	-				+1.1
579,175	+	ybcW	b0559	0.35	-0.3
579,175	+	ybcW	b0559	0.35	+2.7
579,177	+	ybcW	b0559	0.36	+1.1
579,177	+	ybcW	b0559	0.36	+0.1
579,178	+	ybcW	b0559	0.36	+1.7
579,178	+	ybcW	b0559	0.36	+0.4
579,183	+	ybcW	b0559	0.39	+1.1
579,183	+	ybcW	b0559	0.39	+0.7
579,185	-	ybcW	b0559	0.40	+1.5
579,185	-	ybcW	b0559	0.40	-0.1
579,185	-	ybcW	b0559	0.40	-0.6
579,188	+	ybcW	b0559	0.41	-0.5
579,188	+	ybcW	b0559	0.41	+0.4
579,196	-	ybcW	b0559	0.45	-0.7
579,196	-	ybcW	b0559	0.45	-0.5
579,214	-	ybcW	b0559	0.54	+0.7
579,214	-	ybcW	b0559	0.54	-0.5
579,217	-	ybcW	b0559	0.55	+2.7
579,217	-	ybcW	b0559	0.55	+2.7
579,217	-	ybcW	b0559	0.55	-0.5
579,217	-	ybcW	b0559	0.55	-0.6
579,219	-	ybcW	b0559	0.56	+1.4
579,237	-	ybcW	b0559	0.65	+0.7
579,237	-	ybcW	b0559	0.65	+1.1
579,250	-	ybcW	b0559	0.71	-0.7
579,259	+	ybcW	b0559	0.75	-1.7
579,293	-				-0.3
579,293	-				-0.6
579,306	-				+0.1
579,308	+				+1.1
579,309	-				+1.7
579,311	+				+2.7
579,311	+				+0.4
579,313	+				+0.4
579,318	+				+2.7
579,321	-				+1.1
579,321	-				-0.5
579,327	-				+0.4
579,342	+				+0.4
579,342	+				+0.9
579,342	+				+1.4
579,345	-				-1.1
579,345	-				-1.5
579,353	+				+0.4
579,355	-				-0.6
579,365	+				-0.3
579,365	+				-0.1
579,367	-				-0.3
579,377	-				+0.3
579,377	-				-2.0
579,377	-				-1.0
579,409	-				+1.1
579,409	-				+0.4
579,412	-				-0.5
579,442	-				+0.1
579,452	-				-1.2
579,452	-				+1.1
579,453	+				+1.7
579,461	+				+1.7
579,461	+				+0.1
579,479	+				+1.1
579,535	-	ylcI	b4589	0.31	-1.1
579,545	-	ylcI	b4589	0.36	+0.9
579,549	-	ylcI	b4589	0.38	+0.7
580,052	+				-1.3
580,071	-				-1.3
580,215	-	nohB	b0560	0.29	+1.6
580,215	-	nohB	b0560	0.29	-1.4
580,303	-	nohB	b0560	0.45	-0.8