Strain Fitness in Escherichia coli BW25113 around b1238

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
1,291,886	-	hns	b1237	0.37	-0.5
1,292,167	-				-2.5
1,292,218	+				-0.0
1,292,319	-				+0.2
1,292,353	-				+0.5
1,292,383	+				+0.5
1,292,394	+				-0.7
1,292,401	+				-0.0
1,292,409	-				-0.2
1,292,417	-				-1.5
1,292,419	-				+0.1
1,292,469	-				-0.5
1,292,469	-				+1.0
1,292,481	+				+1.1
1,292,497	-				+1.3
1,292,504	+				-0.2
1,292,504	+				-0.5
1,292,508	+				+1.5
1,292,512	-				+2.8
1,292,512	-				-0.5
1,292,519	+				-1.3
1,292,522	-				+0.1
1,292,522	-				+1.0
1,292,527	-				+0.0
1,292,527	-				+0.8
1,292,532	-				+0.8
1,292,537	-				-0.5
1,292,549	-				+0.5
1,292,549	-				+0.6
1,292,552	+				-0.4
1,292,552	-				-0.5
1,292,562	+				-1.5
1,292,572	+				-1.5
1,292,592	-				-1.5
1,292,602	+				+0.5
1,292,604	+				-0.5
1,292,604	+				-1.5
1,292,623	+				-0.9
1,292,623	+				-0.1
1,292,627	+				+0.2
1,292,635	-				-1.3
1,292,644	+				+0.1
1,292,644	+				-0.6
1,292,645	-				+1.1
1,292,645	-				-0.5
1,292,645	-				+0.5
1,292,647	+				-0.4
1,292,652	+				+0.5
1,292,661	+				-0.3
1,292,661	+				-0.5
1,292,665	-				-1.5
1,292,665	-				+0.2
1,292,672	-				+1.1
1,292,682	-				-0.5
1,292,682	-				-0.5
1,292,700	+				-0.2
1,292,735	-				+0.5
1,292,738	+				-1.5
1,292,738	+				+1.3
1,292,739	+				-2.5
1,292,739	+				-0.7
1,292,749	-				-0.5
1,292,794	+				+0.1
1,292,794	+				+0.5
1,292,797	-				+1.2
1,292,798	+				+0.3
1,292,862	-	tdk	b1238	0.18	-0.5
1,292,896	-	tdk	b1238	0.24	-0.5
1,292,898	+	tdk	b1238	0.24	+0.6
1,292,909	+	tdk	b1238	0.26	-0.4
1,292,944	-	tdk	b1238	0.31	+0.6
1,292,957	+	tdk	b1238	0.33	+0.8
1,293,067	+	tdk	b1238	0.51	+0.3
1,293,067	+	tdk	b1238	0.51	+0.1
1,293,146	-	tdk	b1238	0.64	+0.8
1,293,192	+	tdk	b1238	0.72	+0.1
1,293,200	-	tdk	b1238	0.73	-0.5
1,293,209	+	tdk	b1238	0.74	+0.4
1,293,211	-	tdk	b1238	0.75	-0.4
1,293,214	-	tdk	b1238	0.75	-1.5
1,293,217	-	tdk	b1238	0.76	+0.5
1,293,217	-	tdk	b1238	0.76	+2.5
1,293,224	-	tdk	b1238	0.77	+1.5
1,293,238	+	tdk	b1238	0.79	-0.1
1,293,245	-	tdk	b1238	0.80	-1.1
1,293,245	-	tdk	b1238	0.80	+0.9
1,293,270	+	tdk	b1238	0.84	+0.1
1,293,285	+	tdk	b1238	0.87	+1.2
1,293,324	-				+0.2
1,293,384	+				+0.7
1,293,384	+				+0.2
1,293,397	+				+0.2
1,293,471	+				+0.8
1,293,473	+				-0.9
1,293,473	+				+0.1
1,293,479	-				-0.5
1,293,570	+				+0.8
1,293,576	+				-0.1
1,293,576	+				-0.3
1,293,584	-				-0.6
1,293,637	+				+0.4
1,293,637	+				+0.2
1,293,645	-				+0.0
1,293,652	+				+0.6
1,293,750	+	insZ	b4573	0.18	+0.3
1,293,800	-	insZ	b4573	0.27	+0.4
1,293,965	+	insZ	b4573	0.56	+0.1
1,294,028	-	insZ	b4573	0.67	+0.1
1,294,043	-	insZ	b4573	0.69	+0.7
1,294,043	-	insZ	b4573	0.69	+0.5
1,294,144	-	insZ	b4573	0.87	-0.3
1,294,175	-				-0.0
1,294,207	+				+0.2