Experiment: Δdbn_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yehU and mlrA are separated by 221 nucleotides mlrA and yohO are separated by 59 nucleotides yohO and yehW overlap by 20 nucleotides yehW and yehX are separated by 4 nucleotides
b2126: yehU - predicted sensory kinase in two-component system with YehT (NCBI), at 2,210,981 to 2,212,666
yehU
b2127: mlrA - DNA-binding transcriptional regulator (NCBI), at 2,212,888 to 2,213,619
mlrA
b4542: yohO - hypothetical protein (NCBI), at 2,213,679 to 2,213,786
yohO
b2128: yehW - predicted transporter subunit: membrane component of ABC superfamily (NCBI), at 2,213,767 to 2,214,498
yehW
b2129: yehX - predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI), at 2,214,503 to 2,215,429
yehX
Position (kb)
2212
2213
2214 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2211.961 kb on - strand, within yehU at 2211.972 kb on - strand, within yehU at 2211.972 kb on - strand, within yehU at 2212.028 kb on + strand, within yehU at 2212.168 kb on + strand, within yehU at 2212.177 kb on - strand, within yehU at 2212.177 kb on - strand, within yehU at 2212.256 kb on - strand, within yehU at 2212.264 kb on - strand, within yehU at 2212.294 kb on + strand, within yehU at 2212.358 kb on - strand, within yehU at 2212.358 kb on - strand, within yehU at 2212.365 kb on + strand, within yehU at 2212.373 kb on - strand, within yehU at 2212.438 kb on - strand, within yehU at 2212.438 kb on - strand, within yehU at 2212.564 kb on + strand at 2213.000 kb on + strand, within mlrA at 2213.008 kb on - strand, within mlrA at 2213.008 kb on - strand, within mlrA at 2213.066 kb on - strand, within mlrA at 2213.222 kb on - strand, within mlrA at 2213.244 kb on + strand, within mlrA at 2213.370 kb on + strand, within mlrA at 2213.370 kb on + strand, within mlrA at 2213.444 kb on + strand, within mlrA at 2213.484 kb on + strand, within mlrA at 2213.506 kb on + strand, within mlrA at 2213.506 kb on + strand, within mlrA at 2213.513 kb on + strand, within mlrA at 2213.641 kb on + strand at 2213.641 kb on + strand at 2213.646 kb on + strand at 2213.654 kb on - strand at 2213.684 kb on - strand at 2213.781 kb on + strand at 2213.819 kb on + strand at 2213.903 kb on - strand, within yehW at 2213.988 kb on - strand, within yehW at 2214.022 kb on - strand, within yehW at 2214.159 kb on + strand, within yehW at 2214.356 kb on - strand, within yehW at 2214.356 kb on - strand, within yehW at 2214.491 kb on + strand at 2214.491 kb on + strand at 2214.540 kb on + strand at 2214.540 kb on + strand at 2214.554 kb on - strand at 2214.568 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Δdbn_10 remove 2,211,961 - yehU b2126 0.58 +1.0 2,211,972 - yehU b2126 0.59 -3.2 2,211,972 - yehU b2126 0.59 -3.6 2,212,028 + yehU b2126 0.62 -1.9 2,212,168 + yehU b2126 0.70 +1.1 2,212,177 - yehU b2126 0.71 -3.6 2,212,177 - yehU b2126 0.71 -3.2 2,212,256 - yehU b2126 0.76 -0.6 2,212,264 - yehU b2126 0.76 +1.3 2,212,294 + yehU b2126 0.78 +1.0 2,212,358 - yehU b2126 0.82 +1.9 2,212,358 - yehU b2126 0.82 -4.0 2,212,365 + yehU b2126 0.82 -2.1 2,212,373 - yehU b2126 0.83 +1.8 2,212,438 - yehU b2126 0.86 -1.8 2,212,438 - yehU b2126 0.86 -0.1 2,212,564 + -0.2 2,213,000 + mlrA b2127 0.15 -2.6 2,213,008 - mlrA b2127 0.16 -0.7 2,213,008 - mlrA b2127 0.16 -2.2 2,213,066 - mlrA b2127 0.24 -1.3 2,213,222 - mlrA b2127 0.46 -1.3 2,213,244 + mlrA b2127 0.49 +0.1 2,213,370 + mlrA b2127 0.66 -1.4 2,213,370 + mlrA b2127 0.66 -2.2 2,213,444 + mlrA b2127 0.76 +0.7 2,213,484 + mlrA b2127 0.81 -0.8 2,213,506 + mlrA b2127 0.84 -3.1 2,213,506 + mlrA b2127 0.84 -3.0 2,213,513 + mlrA b2127 0.85 -2.3 2,213,641 + -0.2 2,213,641 + -2.9 2,213,646 + -2.7 2,213,654 - -4.1 2,213,684 - +2.5 2,213,781 + +1.6 2,213,819 + +0.5 2,213,903 - yehW b2128 0.19 -0.2 2,213,988 - yehW b2128 0.30 +0.2 2,214,022 - yehW b2128 0.35 -0.9 2,214,159 + yehW b2128 0.54 +0.3 2,214,356 - yehW b2128 0.80 -0.4 2,214,356 - yehW b2128 0.80 +1.1 2,214,491 + +0.6 2,214,491 + -0.8 2,214,540 + +1.4 2,214,540 + +0.5 2,214,554 - -3.2 2,214,568 - -0.9
Or see this region's nucleotide sequence