Strain Fitness in Pseudomonas putida KT2440 around PP_5553

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
3,418,291	-		PP_3031	0.62	+0.9
3,418,402	+				-0.4
3,418,402	+				+0.5
3,418,402	+				-1.4
3,418,580	+				+0.9
3,418,673	+		PP_3032	0.35	-0.4
3,418,865	+				+0.0
3,418,880	-				-0.1
3,418,880	-				+0.5
3,418,882	+				-1.6
3,418,883	-				-0.8
3,418,883	-				-1.2
3,418,932	+		PP_5552	0.22	+0.1
3,419,137	-		PP_5552	0.88	-1.2
3,419,168	+				-1.2
3,419,195	-		PP_5553	0.13	+0.5
3,419,195	-		PP_5553	0.13	+2.0
3,419,228	+		PP_5553	0.32	+1.7
3,419,229	-		PP_5553	0.33	+0.2
3,419,241	-		PP_5553	0.40	-0.4
3,419,241	-		PP_5553	0.40	+0.9
3,419,241	-		PP_5553	0.40	-0.6
3,419,292	+		PP_5553	0.69	+0.4
3,419,325	+		PP_5553	0.88	+0.5
3,419,325	+		PP_5553	0.88	+0.9
3,419,325	+		PP_5553	0.88	-0.2
3,419,325	+				+0.4
3,419,325	+		PP_5553	0.88	+0.9
3,419,326	-		PP_5553	0.89	+0.8
3,419,326	-				+0.9
3,419,326	-		PP_5553	0.89	+0.4
3,419,326	-		PP_5553	0.89	+2.7
3,419,326	-		PP_5553	0.89	+0.2
3,419,348	+				+0.9
3,419,348	+				+0.4