Experiment: L-Phenylalanine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4192 and PP_4193 overlap by 7 nucleotides PP_4193 and PP_4194 are separated by 352 nucleotides PP_4194 and PP_4195 are separated by 752 nucleotides
PP_4192: PP_4192 - succinate dehydrogenase hydrophobic membrane anchor subunit, at 4,738,373 to 4,738,741
_4192
PP_4193: PP_4193 - succinate dehydrogenase membrane b-556 subunit, at 4,738,735 to 4,739,121
_4193
PP_4194: PP_4194 - citrate synthase, at 4,739,474 to 4,740,763
_4194
PP_4195: PP_4195 - putative oxidoreductase, at 4,741,516 to 4,741,770
_4195
Position (kb)
4739
4740
4741 Strain fitness (log2 ratio)
-1
0
1
2 at 4739.167 kb on - strand at 4739.250 kb on - strand at 4739.258 kb on - strand at 4739.294 kb on - strand at 4739.323 kb on + strand at 4739.410 kb on + strand at 4739.410 kb on + strand at 4739.460 kb on + strand at 4740.762 kb on - strand at 4740.762 kb on - strand at 4740.967 kb on + strand at 4740.994 kb on - strand at 4740.994 kb on - strand at 4741.084 kb on - strand at 4741.084 kb on - strand at 4741.084 kb on - strand at 4741.084 kb on - strand at 4741.142 kb on - strand at 4741.184 kb on - strand at 4741.195 kb on + strand at 4741.196 kb on - strand at 4741.197 kb on + strand at 4741.197 kb on + strand at 4741.197 kb on + strand at 4741.197 kb on + strand at 4741.198 kb on - strand at 4741.198 kb on - strand at 4741.198 kb on - strand at 4741.198 kb on - strand at 4741.198 kb on - strand at 4741.343 kb on + strand at 4741.344 kb on - strand at 4741.464 kb on + strand at 4741.465 kb on - strand at 4741.465 kb on - strand at 4741.465 kb on - strand at 4741.465 kb on - strand at 4741.465 kb on - strand at 4741.489 kb on + strand at 4741.489 kb on + strand at 4741.489 kb on + strand at 4741.490 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine 5 mM (C) remove 4,739,167 - +1.5 4,739,250 - +2.5 4,739,258 - -0.5 4,739,294 - +0.9 4,739,323 + +1.5 4,739,410 + +2.5 4,739,410 + +0.5 4,739,460 + +2.5 4,740,762 - +0.9 4,740,762 - -0.3 4,740,967 + +0.9 4,740,994 - +0.3 4,740,994 - +0.0 4,741,084 - -0.3 4,741,084 - -0.7 4,741,084 - -1.6 4,741,084 - +0.7 4,741,142 - +0.6 4,741,184 - -0.7 4,741,195 + -0.7 4,741,196 - -0.2 4,741,197 + -1.7 4,741,197 + +0.2 4,741,197 + -0.2 4,741,197 + +0.6 4,741,198 - -0.2 4,741,198 - +0.7 4,741,198 - +0.6 4,741,198 - +2.5 4,741,198 - +0.8 4,741,343 + +0.2 4,741,344 - -1.3 4,741,464 + +1.1 4,741,465 - +0.3 4,741,465 - +0.4 4,741,465 - +0.3 4,741,465 - +0.9 4,741,465 - -1.0 4,741,489 + -0.5 4,741,489 + +0.5 4,741,489 + +0.7 4,741,490 - -0.5
Or see this region's nucleotide sequence