Strain Fitness in Pseudomonas putida KT2440 around PP_2721

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
3,107,309	+				+2.8
3,107,309	+				-0.2
3,107,514	+		PP_2718	0.42	+0.1
3,107,515	-		PP_2718	0.42	-1.0
3,107,515	-		PP_2718	0.42	+0.7
3,107,768	-				-0.7
3,107,875	+				-0.4
3,107,875	+				+0.9
3,107,875	+				+0.3
3,107,876	-				+0.8
3,107,877	+				-1.4
3,107,878	-				+0.5
3,107,878	-				+1.1
3,107,941	+		PP_2719	0.37	-0.9
3,108,253	-		PP_2720	0.78	-0.6
3,108,337	-		PP_2721	0.16	+0.2
3,108,390	+		PP_2721	0.31	-0.3
3,108,487	+		PP_2721	0.59	-2.0
3,108,487	+		PP_2721	0.59	-3.0
3,108,488	-		PP_2721	0.59	-0.7
3,108,501	+		PP_2721	0.63	-0.8
3,108,502	-		PP_2721	0.63	-1.2
3,108,550	-		PP_2721	0.77	-1.1
3,108,884	+		PP_2722	0.42	-0.0
3,108,885	-		PP_2722	0.42	-1.1
3,108,943	+		PP_2722	0.54	-1.0
3,108,943	+		PP_2722	0.54	+1.1
3,108,944	-		PP_2722	0.55	+0.2
3,108,946	+		PP_2722	0.55	+0.4
3,108,946	+		PP_2722	0.55	+0.4
3,108,947	-		PP_2722	0.55	+0.4
3,109,117	-				-0.0
3,109,122	-				+0.1
3,109,204	+				+0.4
3,109,204	+				+0.1
3,109,230	+				-1.4
3,109,269	-				+1.1
3,109,331	+				-0.4
3,109,332	-				-1.2
3,109,373	-				-0.6
3,109,373	-				-0.3
3,109,402	+				+1.4
3,109,402	+				+0.2
3,109,403	-				+0.5
3,109,403	-				-1.3
3,109,403	-				-0.8
3,109,403	-				-0.8
3,109,589	+		PP_2723	0.31	+0.6