Strain Fitness in Pseudomonas putida KT2440 around PP_0751

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
867,215	-		PP_0749	0.30	+1.0
867,215	-		PP_0749	0.30	-1.5
867,227	+		PP_0749	0.33	+0.6
867,382	+		PP_0749	0.66	-0.6
867,382	+		PP_0749	0.66	-0.5
867,382	+		PP_0749	0.66	+1.5
867,382	+		PP_0749	0.66	-0.4
867,382	+		PP_0749	0.66	+0.2
867,383	-		PP_0749	0.66	+0.5
867,383	-		PP_0749	0.66	-1.7
867,383	-		PP_0749	0.66	-0.8
867,383	-		PP_0749	0.66	-0.0
867,431	-		PP_0749	0.76	+0.7
867,534	+				-0.2
867,534	+				-1.0
867,535	-				-1.0
867,535	-				-0.2
867,535	-				+0.9
867,535	-				+0.8
867,617	+				-1.5
867,617	+				-1.4
867,634	+		PP_0750	0.15	+0.1
867,660	+		PP_0750	0.23	-0.6
867,660	+				+0.8
867,660	+		PP_0750	0.23	-0.7
867,661	-		PP_0750	0.23	+1.2
867,661	-		PP_0750	0.23	-0.5
867,736	-		PP_0750	0.47	+0.5
867,773	-		PP_0750	0.59	-1.4
867,773	-		PP_0750	0.59	-1.5
867,871	-				+0.2
867,871	-				-0.0
867,871	-				-0.2
867,871	-				-0.2
867,887	+				+0.1
867,887	+				-0.8
867,888	-				-1.0
867,888	-				-1.0
868,014	+				-0.2
868,080	+				-0.1
868,080	+				+0.4
868,087	-				-0.4
869,608	-				+0.6
869,608	-				+0.5
869,618	-				+0.2
869,618	-				+0.1
869,618	-				+0.2
869,618	-				-1.2
869,618	-				+0.2
869,618	-				+0.3
869,630	-				+0.0
869,630	-				+0.2
869,630	-				-1.6
869,630	-				-0.4
869,630	-				+0.5
869,630	-				+0.5
869,630	-				+0.6
869,758	-				+1.0
869,805	-				+0.5
870,117	-				-2.6
870,117	-				-0.5
870,119	-				+1.1
870,134	-				-0.5
870,134	-				-0.5
870,136	-				-0.2
870,136	-				-1.1
870,136	-				+0.3
870,136	-				-3.0
870,176	-				+0.8
870,374	-		PP_5456	0.79	+0.0
870,374	-		PP_5456	0.79	-0.1
870,461	-				-0.0
870,524	+				-0.6
870,524	+				-0.1
870,528	+				-2.0
870,528	+				-1.6
870,528	+				+0.9
870,528	+				-0.4
870,528	+				+0.1
870,528	+				+0.3
870,528	+				+0.3
870,528	+				-2.3
870,529	-				-0.5
870,529	-				+1.0
870,529	-				-1.2
870,529	-				+0.7
870,529	-				+0.8
870,529	-				-2.1
870,529	-				+0.6
870,529	-				-0.0
870,530	+				-0.5
870,530	+				-3.2
870,530	+				+0.3
870,531	-				-0.7
870,531	-				-0.8
870,531	-				-0.4
870,531	-				+0.5
870,531	-				+0.5
870,531	-				+1.4
870,531	-				+0.5
870,531	-				-0.0
870,531	-				+0.0
870,531	-				-0.0
870,531	-				-0.6
870,531	-				-0.7
870,531	-				+1.0
870,531	-				-0.6