Strain Fitness in Pseudomonas putida KT2440 around PP_3284

Experiment: L-Phenylalanine 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine 5 mM (C)
3,717,692	+				+0.6
3,717,970	+		PP_3283	0.21	-0.2
3,717,971	-		PP_3283	0.21	+0.4
3,717,971	-		PP_3283	0.21	-1.2
3,718,148	+		PP_3283	0.44	-0.1
3,718,148	+		PP_3283	0.44	+0.4
3,718,281	+		PP_3283	0.61	-0.4
3,718,281	+		PP_3283	0.61	+0.0
3,718,281	+		PP_3283	0.61	+1.1
3,718,327	+		PP_3283	0.66	-0.3
3,718,328	-		PP_3283	0.67	+1.1
3,718,506	-		PP_3283	0.89	+1.3
3,718,506	-		PP_3283	0.89	+0.2
3,718,844	-		PP_3284	0.28	-2.5
3,718,960	+		PP_3284	0.43	-0.8
3,718,960	+		PP_3284	0.43	+0.6
3,718,961	-		PP_3284	0.43	+0.3
3,718,961	-		PP_3284	0.43	+0.7
3,719,149	+		PP_3284	0.67	+0.4
3,719,305	+		PP_3284	0.88	+0.3
3,719,388	+				-0.4
3,719,388	+				+0.3
3,719,388	+				+0.3
3,719,388	+				+0.2
3,719,389	-				+0.8
3,719,390	+				-1.3
3,719,391	-				-0.8
3,719,472	-				+0.1
3,719,472	-				-0.3
3,719,472	-				-0.9
3,719,503	+				-1.0
3,719,503	+				-0.9
3,719,504	-				-1.9
3,719,569	-				+1.6
3,719,632	+				+0.6
3,719,633	-				+0.2
3,719,676	-				+0.4
3,719,798	+				-0.4
3,719,798	+				-0.5
3,719,798	+				+0.5
3,719,798	+				+0.0
3,719,799	-				-0.2
3,719,799	-				-0.4
3,719,852	+		PP_3285	0.17	+0.5
3,719,853	-		PP_3285	0.18	-0.8
3,719,974	+		PP_3285	0.38	-0.5
3,720,072	+		PP_3285	0.54	-0.2
3,720,072	+		PP_3285	0.54	-0.1
3,720,072	+		PP_3285	0.54	-0.5
3,720,073	-		PP_3285	0.54	-0.4
3,720,073	-		PP_3285	0.54	-0.4
3,720,073	-		PP_3285	0.54	-1.3
3,720,073	-		PP_3285	0.54	+0.8
3,720,222	-		PP_3285	0.79	+0.4
3,720,390	+				-0.6
3,720,390	+				-0.6
3,720,390	+				-0.1
3,720,390	+				-1.7
3,720,391	-				+0.6
3,720,391	-				-0.4
3,720,391	-				-0.1
3,720,391	-				+0.1
3,720,392	+				-0.1
3,720,392	+				-1.1
3,720,393	-				+0.2
3,720,393	-				+0.5
3,720,393	-				+0.6
3,720,393	-				-0.2