Experiment: L-Phenylalanine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0558 and PP_0559 are separated by 17 nucleotides PP_0559 and PP_0560 are separated by 99 nucleotides PP_0560 and PP_0561 are separated by 179 nucleotides
PP_0558: PP_0558 - acetyl-CoA carboxylase - biotin carboxylase subunit, at 648,322 to 649,677
_0558
PP_0559: PP_0559 - acetyl-CoA carboxylase - biotin carboxyl carrier subunit, at 649,695 to 650,156
_0559
PP_0560: PP_0560 - 3-dehydroquinate dehydratase 1, type II, at 650,256 to 650,711
_0560
PP_0561: PP_0561 - thiol/disulfide interchange protein 1, at 650,891 to 652,663
_0561
Position (kb) 650
651 Strain fitness (log2 ratio) -2
-1
0
1 at 650.767 kb on - strand at 650.831 kb on - strand at 650.831 kb on - strand at 650.846 kb on + strand at 650.893 kb on - strand at 650.894 kb on + strand at 650.894 kb on + strand at 650.948 kb on + strand at 651.174 kb on + strand, within PP_0561 at 651.263 kb on - strand, within PP_0561 at 651.354 kb on + strand, within PP_0561 at 651.509 kb on + strand, within PP_0561 at 651.548 kb on + strand, within PP_0561 at 651.549 kb on - strand, within PP_0561 at 651.703 kb on + strand, within PP_0561 at 651.704 kb on - strand, within PP_0561 at 651.704 kb on - strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.705 kb on + strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561 at 651.706 kb on - strand, within PP_0561
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine 5 mM (C) remove 650,767 - -0.2 650,831 - -1.1 650,831 - -1.9 650,846 + -0.3 650,893 - +1.2 650,894 + -0.4 650,894 + -0.1 650,948 + +0.5 651,174 + PP_0561 0.16 -0.4 651,263 - PP_0561 0.21 -0.1 651,354 + PP_0561 0.26 +1.0 651,509 + PP_0561 0.35 -2.2 651,548 + PP_0561 0.37 -0.2 651,549 - PP_0561 0.37 +0.0 651,703 + PP_0561 0.46 -0.0 651,704 - PP_0561 0.46 -1.9 651,704 - PP_0561 0.46 -0.4 651,705 + PP_0561 0.46 +0.0 651,705 + PP_0561 0.46 +1.3 651,705 + PP_0561 0.46 +1.3 651,705 + PP_0561 0.46 +0.4 651,706 - PP_0561 0.46 -0.4 651,706 - PP_0561 0.46 -0.2 651,706 - PP_0561 0.46 +1.2 651,706 - PP_0561 0.46 -1.1 651,706 - PP_0561 0.46 -0.5 651,706 - PP_0561 0.46 +1.4 651,706 - PP_0561 0.46 +0.5
Or see this region's nucleotide sequence