Experiment: L-Phenylalanine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0421 and PP_0422 overlap by 4 nucleotides PP_0422 and PP_0423 are separated by 147 nucleotides PP_0423 and PP_0424 overlap by 4 nucleotides
PP_0421: PP_0421 - Anthranilate phosphoribosyltransferase, at 509,981 to 511,030
_0421
PP_0422: PP_0422 - Indole-3-glycerol phosphate synthase, at 511,027 to 511,860
_0422
PP_0423: PP_0423 - conserved protein of unknown function, at 512,008 to 512,712
_0423
PP_0424: PP_0424 - DNA-binding transcriptional dual regulator, at 512,709 to 513,353
_0424
Position (kb) 511
512 Strain fitness (log2 ratio) -1
0
1
2 at 510.032 kb on - strand at 510.093 kb on + strand, within PP_0421 at 510.093 kb on + strand, within PP_0421 at 510.316 kb on + strand, within PP_0421 at 510.374 kb on + strand, within PP_0421 at 510.374 kb on - strand, within PP_0421 at 510.514 kb on + strand, within PP_0421 at 510.514 kb on + strand, within PP_0421 at 510.515 kb on - strand, within PP_0421 at 510.529 kb on + strand, within PP_0421 at 510.529 kb on + strand, within PP_0421 at 510.529 kb on + strand, within PP_0421 at 510.530 kb on - strand, within PP_0421 at 510.722 kb on + strand, within PP_0421 at 510.723 kb on - strand, within PP_0421 at 510.874 kb on + strand, within PP_0421 at 510.875 kb on - strand, within PP_0421 at 510.875 kb on - strand, within PP_0421 at 510.893 kb on + strand, within PP_0421 at 510.893 kb on + strand, within PP_0421 at 510.893 kb on + strand, within PP_0421 at 510.893 kb on + strand, within PP_0421 at 510.893 kb on + strand, within PP_0421 at 510.894 kb on - strand, within PP_0421 at 510.930 kb on + strand at 510.931 kb on - strand at 510.948 kb on + strand at 510.949 kb on - strand at 510.949 kb on - strand at 510.949 kb on - strand at 510.949 kb on - strand at 510.949 kb on - strand at 510.998 kb on - strand at 510.998 kb on - strand at 510.998 kb on - strand at 511.005 kb on + strand at 511.005 kb on + strand at 511.006 kb on - strand at 511.279 kb on + strand, within PP_0422 at 511.279 kb on + strand, within PP_0422 at 511.327 kb on + strand, within PP_0422 at 511.348 kb on + strand, within PP_0422 at 511.349 kb on - strand, within PP_0422 at 511.349 kb on - strand, within PP_0422 at 511.587 kb on + strand, within PP_0422 at 511.587 kb on + strand, within PP_0422 at 511.705 kb on - strand, within PP_0422 at 511.902 kb on - strand at 511.931 kb on + strand at 511.931 kb on + strand at 511.997 kb on + strand at 511.997 kb on + strand at 511.997 kb on + strand at 511.998 kb on - strand at 511.998 kb on - strand at 512.425 kb on + strand, within PP_0423 at 512.645 kb on + strand at 512.677 kb on + strand at 512.687 kb on + strand at 512.687 kb on + strand at 512.688 kb on - strand at 512.688 kb on - strand at 512.688 kb on - strand at 512.710 kb on + strand at 512.711 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine 5 mM (C) remove 510,032 - +0.8 510,093 + PP_0421 0.11 +0.8 510,093 + PP_0421 0.11 +0.4 510,316 + PP_0421 0.32 +2.4 510,374 + PP_0421 0.37 +0.8 510,374 - PP_0421 0.37 -0.2 510,514 + PP_0421 0.51 -0.2 510,514 + PP_0421 0.51 +0.8 510,515 - PP_0421 0.51 +2.4 510,529 + PP_0421 0.52 -0.4 510,529 + PP_0421 0.52 +2.4 510,529 + PP_0421 0.52 +2.4 510,530 - PP_0421 0.52 +1.4 510,722 + PP_0421 0.71 +0.8 510,723 - PP_0421 0.71 +0.4 510,874 + PP_0421 0.85 +2.4 510,875 - PP_0421 0.85 -0.2 510,875 - PP_0421 0.85 +0.4 510,893 + PP_0421 0.87 +1.4 510,893 + PP_0421 0.87 +2.4 510,893 + PP_0421 0.87 +0.4 510,893 + PP_0421 0.87 -0.2 510,893 + PP_0421 0.87 -0.4 510,894 - PP_0421 0.87 +2.4 510,930 + -1.6 510,931 - +1.4 510,948 + -0.8 510,949 - +0.8 510,949 - +0.4 510,949 - +2.4 510,949 - +2.4 510,949 - +0.4 510,998 - +0.8 510,998 - +0.1 510,998 - +1.4 511,005 + +1.1 511,005 + -1.6 511,006 - +1.8 511,279 + PP_0422 0.30 +0.8 511,279 + PP_0422 0.30 -1.2 511,327 + PP_0422 0.36 -0.6 511,348 + PP_0422 0.38 +0.4 511,349 - PP_0422 0.39 +0.8 511,349 - PP_0422 0.39 +0.8 511,587 + PP_0422 0.67 +2.4 511,587 + PP_0422 0.67 -1.2 511,705 - PP_0422 0.81 +2.4 511,902 - +1.4 511,931 + -0.6 511,931 + -1.4 511,997 + -0.9 511,997 + +0.7 511,997 + -1.0 511,998 - -0.4 511,998 - +0.1 512,425 + PP_0423 0.59 -0.8 512,645 + +0.5 512,677 + +1.2 512,687 + -0.4 512,687 + -0.1 512,688 - -1.4 512,688 - +0.3 512,688 - -0.4 512,710 + +0.9 512,711 - -0.7
Or see this region's nucleotide sequence