Experiment: L-Phenylalanine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4497 and PP_4498 overlap by 14 nucleotides PP_4498 and PP_4499 overlap by 37 nucleotides PP_4499 and PP_4500 overlap by 23 nucleotides
PP_4497: PP_4497 - conserved protein of unknown function, at 5,112,677 to 5,113,444
_4497
PP_4498: PP_4498 - Segregation and condensation protein A, at 5,113,431 to 5,114,318
_4498
PP_4499: PP_4499 - putative maturation enzyme, at 5,114,282 to 5,114,947
_4499
PP_4500: PP_4500 - TrpH family protein, at 5,114,925 to 5,115,785
_4500
Position (kb) 5113
5114
5115 Strain fitness (log2 ratio) -2
-1
0
1 at 5112.513 kb on + strand at 5112.591 kb on + strand at 5112.592 kb on - strand at 5112.623 kb on - strand at 5113.069 kb on + strand, within PP_4497 at 5113.069 kb on + strand, within PP_4497 at 5113.069 kb on + strand, within PP_4497 at 5113.070 kb on - strand, within PP_4497 at 5113.070 kb on - strand, within PP_4497 at 5113.131 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.215 kb on + strand, within PP_4497 at 5113.216 kb on - strand, within PP_4497 at 5113.356 kb on + strand, within PP_4497 at 5113.357 kb on - strand, within PP_4497 at 5113.773 kb on + strand, within PP_4498 at 5113.773 kb on + strand, within PP_4498 at 5113.870 kb on + strand, within PP_4498 at 5113.870 kb on + strand, within PP_4498 at 5113.871 kb on - strand, within PP_4498 at 5113.991 kb on - strand, within PP_4498 at 5114.013 kb on + strand, within PP_4498 at 5114.014 kb on - strand, within PP_4498 at 5114.014 kb on - strand, within PP_4498 at 5114.035 kb on + strand, within PP_4498 at 5114.035 kb on + strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.036 kb on - strand, within PP_4498 at 5114.044 kb on + strand at 5114.044 kb on + strand, within PP_4498 at 5114.044 kb on + strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.045 kb on - strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.087 kb on + strand, within PP_4498 at 5114.107 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.173 kb on + strand, within PP_4498 at 5114.174 kb on - strand, within PP_4498 at 5114.174 kb on - strand, within PP_4498 at 5114.209 kb on + strand, within PP_4498 at 5114.561 kb on - strand, within PP_4499 at 5114.679 kb on + strand, within PP_4499 at 5114.680 kb on - strand, within PP_4499 at 5114.780 kb on + strand, within PP_4499 at 5114.780 kb on + strand, within PP_4499 at 5114.862 kb on - strand, within PP_4499 at 5114.913 kb on + strand at 5114.913 kb on + strand at 5114.914 kb on - strand at 5115.149 kb on + strand, within PP_4500 at 5115.150 kb on - strand, within PP_4500 at 5115.150 kb on - strand, within PP_4500 at 5115.150 kb on - strand, within PP_4500 at 5115.151 kb on + strand, within PP_4500 at 5115.151 kb on + strand, within PP_4500 at 5115.193 kb on + strand, within PP_4500 at 5115.193 kb on + strand, within PP_4500 at 5115.194 kb on - strand, within PP_4500
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine 5 mM (C) remove 5,112,513 + +0.2 5,112,591 + +0.6 5,112,592 - +1.3 5,112,623 - -0.6 5,113,069 + PP_4497 0.51 -0.5 5,113,069 + PP_4497 0.51 +0.2 5,113,069 + PP_4497 0.51 +0.3 5,113,070 - PP_4497 0.51 +0.8 5,113,070 - PP_4497 0.51 -1.2 5,113,131 + PP_4497 0.59 +0.7 5,113,215 + PP_4497 0.70 -0.4 5,113,215 + PP_4497 0.70 -2.4 5,113,215 + PP_4497 0.70 +1.5 5,113,215 + PP_4497 0.70 -0.1 5,113,215 + PP_4497 0.70 -0.5 5,113,216 - PP_4497 0.70 -0.0 5,113,356 + PP_4497 0.88 -1.0 5,113,357 - PP_4497 0.89 -0.2 5,113,773 + PP_4498 0.39 +1.0 5,113,773 + PP_4498 0.39 -0.7 5,113,870 + PP_4498 0.49 +0.2 5,113,870 + PP_4498 0.49 -1.5 5,113,871 - PP_4498 0.50 -0.5 5,113,991 - PP_4498 0.63 -0.6 5,114,013 + PP_4498 0.66 -1.5 5,114,014 - PP_4498 0.66 -1.4 5,114,014 - PP_4498 0.66 +0.4 5,114,035 + PP_4498 0.68 +0.6 5,114,035 + PP_4498 0.68 +0.3 5,114,036 - PP_4498 0.68 -0.9 5,114,036 - PP_4498 0.68 +0.4 5,114,036 - PP_4498 0.68 +0.3 5,114,044 + -0.0 5,114,044 + PP_4498 0.69 -2.1 5,114,044 + PP_4498 0.69 -1.6 5,114,045 - PP_4498 0.69 -0.0 5,114,045 - PP_4498 0.69 +0.5 5,114,045 - PP_4498 0.69 -0.8 5,114,045 - PP_4498 0.69 -1.2 5,114,087 + PP_4498 0.74 +1.3 5,114,087 + PP_4498 0.74 -1.2 5,114,087 + PP_4498 0.74 +0.3 5,114,087 + PP_4498 0.74 -1.3 5,114,107 + PP_4498 0.76 -0.3 5,114,173 + PP_4498 0.84 -0.4 5,114,173 + PP_4498 0.84 +0.9 5,114,173 + PP_4498 0.84 +0.8 5,114,174 - PP_4498 0.84 +1.0 5,114,174 - PP_4498 0.84 +0.2 5,114,209 + PP_4498 0.88 -0.3 5,114,561 - PP_4499 0.42 -1.5 5,114,679 + PP_4499 0.60 +0.1 5,114,680 - PP_4499 0.60 +0.3 5,114,780 + PP_4499 0.75 +1.3 5,114,780 + PP_4499 0.75 -0.4 5,114,862 - PP_4499 0.87 +1.5 5,114,913 + +0.0 5,114,913 + +0.9 5,114,914 - -0.1 5,115,149 + PP_4500 0.26 -0.9 5,115,150 - PP_4500 0.26 +0.4 5,115,150 - PP_4500 0.26 -0.3 5,115,150 - PP_4500 0.26 +0.5 5,115,151 + PP_4500 0.26 +1.1 5,115,151 + PP_4500 0.26 -0.6 5,115,193 + PP_4500 0.31 -0.3 5,115,193 + PP_4500 0.31 -0.5 5,115,194 - PP_4500 0.31 -1.2
Or see this region's nucleotide sequence