Experiment: L-tyrosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4881 and PP_4882 overlap by 1 nucleotides PP_4882 and PP_5717 are separated by 660 nucleotides
PP_4881: PP_4881 - putative Iron ABC transporter, periplasmic iron-binding protein, at 5,549,759 to 5,550,772
_4881
PP_4882: PP_4882 - Iron ABC transporter, permease protein, at 5,550,772 to 5,552,337
_4882
PP_5717: PP_5717 - conserved protein of unknown function, at 5,552,998 to 5,553,372
_5717
Position (kb) 5550
5551
5552
5553 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5549.788 kb on + strand at 5549.867 kb on + strand, within PP_4881 at 5549.867 kb on + strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.868 kb on - strand, within PP_4881 at 5549.912 kb on + strand, within PP_4881 at 5549.912 kb on + strand, within PP_4881 at 5549.913 kb on - strand, within PP_4881 at 5549.913 kb on - strand, within PP_4881 at 5550.018 kb on - strand, within PP_4881 at 5550.018 kb on - strand, within PP_4881 at 5550.110 kb on + strand, within PP_4881 at 5550.110 kb on + strand, within PP_4881 at 5550.111 kb on - strand, within PP_4881 at 5550.167 kb on + strand, within PP_4881 at 5550.167 kb on + strand, within PP_4881 at 5550.167 kb on + strand, within PP_4881 at 5550.168 kb on - strand, within PP_4881 at 5550.168 kb on - strand, within PP_4881 at 5550.252 kb on - strand, within PP_4881 at 5550.362 kb on + strand, within PP_4881 at 5550.362 kb on + strand, within PP_4881 at 5550.362 kb on + strand, within PP_4881 at 5550.363 kb on - strand, within PP_4881 at 5550.418 kb on - strand, within PP_4881 at 5550.431 kb on + strand, within PP_4881 at 5550.431 kb on + strand, within PP_4881 at 5550.431 kb on + strand, within PP_4881 at 5550.431 kb on + strand, within PP_4881 at 5550.431 kb on + strand, within PP_4881 at 5550.432 kb on - strand, within PP_4881 at 5550.432 kb on - strand, within PP_4881 at 5550.432 kb on - strand, within PP_4881 at 5550.432 kb on - strand, within PP_4881 at 5550.432 kb on - strand, within PP_4881 at 5550.434 kb on + strand, within PP_4881 at 5550.435 kb on - strand, within PP_4881 at 5550.441 kb on - strand, within PP_4881 at 5550.485 kb on + strand, within PP_4881 at 5550.485 kb on + strand, within PP_4881 at 5550.485 kb on + strand, within PP_4881 at 5550.485 kb on + strand, within PP_4881 at 5550.485 kb on + strand, within PP_4881 at 5550.486 kb on - strand, within PP_4881 at 5550.486 kb on - strand, within PP_4881 at 5550.520 kb on + strand, within PP_4881 at 5550.521 kb on - strand, within PP_4881 at 5550.521 kb on - strand, within PP_4881 at 5550.636 kb on - strand, within PP_4881 at 5550.843 kb on - strand at 5550.843 kb on - strand at 5550.863 kb on + strand at 5550.863 kb on + strand at 5550.864 kb on - strand at 5550.892 kb on + strand at 5550.892 kb on + strand at 5550.893 kb on - strand at 5550.893 kb on - strand at 5550.893 kb on - strand at 5550.893 kb on - strand at 5551.146 kb on - strand, within PP_4882 at 5551.146 kb on - strand, within PP_4882 at 5551.201 kb on + strand, within PP_4882 at 5551.352 kb on + strand, within PP_4882 at 5551.368 kb on + strand, within PP_4882 at 5551.368 kb on + strand, within PP_4882 at 5551.368 kb on + strand, within PP_4882 at 5551.368 kb on + strand, within PP_4882 at 5551.368 kb on + strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.369 kb on - strand, within PP_4882 at 5551.429 kb on + strand, within PP_4882 at 5551.430 kb on - strand, within PP_4882 at 5551.550 kb on + strand, within PP_4882 at 5551.550 kb on + strand, within PP_4882 at 5551.551 kb on - strand, within PP_4882 at 5551.551 kb on - strand, within PP_4882 at 5551.551 kb on - strand, within PP_4882 at 5551.551 kb on - strand, within PP_4882 at 5551.551 kb on - strand, within PP_4882 at 5551.568 kb on + strand, within PP_4882 at 5551.797 kb on + strand, within PP_4882 at 5551.797 kb on + strand, within PP_4882 at 5551.797 kb on + strand, within PP_4882 at 5551.820 kb on - strand, within PP_4882 at 5551.858 kb on + strand, within PP_4882 at 5551.859 kb on - strand, within PP_4882 at 5551.921 kb on + strand, within PP_4882 at 5551.921 kb on + strand, within PP_4882 at 5551.921 kb on + strand, within PP_4882 at 5551.922 kb on - strand, within PP_4882 at 5551.922 kb on - strand, within PP_4882 at 5551.922 kb on - strand, within PP_4882 at 5551.936 kb on + strand, within PP_4882 at 5551.966 kb on + strand, within PP_4882 at 5551.967 kb on - strand, within PP_4882 at 5551.967 kb on - strand, within PP_4882 at 5552.299 kb on + strand at 5552.299 kb on + strand at 5552.300 kb on - strand at 5552.452 kb on + strand at 5552.455 kb on + strand at 5552.456 kb on - strand at 5552.456 kb on - strand at 5552.523 kb on + strand at 5552.569 kb on - strand at 5552.593 kb on + strand at 5552.680 kb on + strand at 5552.695 kb on + strand at 5552.696 kb on - strand at 5552.696 kb on - strand at 5552.699 kb on + strand at 5552.727 kb on + strand at 5552.728 kb on - strand at 5552.728 kb on - strand at 5552.742 kb on + strand at 5552.789 kb on + strand at 5552.789 kb on + strand at 5552.790 kb on - strand at 5552.812 kb on - strand at 5552.849 kb on + strand at 5552.999 kb on + strand at 5553.009 kb on - strand at 5553.125 kb on - strand, within PP_5717 at 5553.219 kb on - strand, within PP_5717 at 5553.330 kb on + strand, within PP_5717 at 5553.331 kb on - strand, within PP_5717
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine 5 mM (C) remove 5,549,788 + +0.6 5,549,867 + PP_4881 0.11 -0.8 5,549,867 + PP_4881 0.11 -0.6 5,549,868 - PP_4881 0.11 -0.7 5,549,868 - PP_4881 0.11 -0.4 5,549,868 - +2.3 5,549,868 - PP_4881 0.11 -0.2 5,549,868 - PP_4881 0.11 -1.3 5,549,868 - PP_4881 0.11 -1.4 5,549,868 - PP_4881 0.11 -0.5 5,549,868 - PP_4881 0.11 +0.2 5,549,868 - PP_4881 0.11 -1.4 5,549,868 - PP_4881 0.11 -0.5 5,549,868 - PP_4881 0.11 +0.9 5,549,912 + PP_4881 0.15 +0.1 5,549,912 + PP_4881 0.15 +0.4 5,549,913 - PP_4881 0.15 -0.6 5,549,913 - PP_4881 0.15 +0.4 5,550,018 - PP_4881 0.26 -0.6 5,550,018 - PP_4881 0.26 -1.2 5,550,110 + PP_4881 0.35 -0.0 5,550,110 + PP_4881 0.35 -0.3 5,550,111 - PP_4881 0.35 -0.4 5,550,167 + PP_4881 0.40 -2.7 5,550,167 + PP_4881 0.40 -0.2 5,550,167 + PP_4881 0.40 -0.9 5,550,168 - PP_4881 0.40 +0.2 5,550,168 - PP_4881 0.40 +0.1 5,550,252 - PP_4881 0.49 -0.5 5,550,362 + PP_4881 0.59 +0.1 5,550,362 + PP_4881 0.59 +1.7 5,550,362 + PP_4881 0.59 +0.2 5,550,363 - PP_4881 0.60 -0.1 5,550,418 - PP_4881 0.65 +0.4 5,550,431 + PP_4881 0.66 +0.1 5,550,431 + PP_4881 0.66 -0.7 5,550,431 + PP_4881 0.66 -0.6 5,550,431 + PP_4881 0.66 +1.0 5,550,431 + PP_4881 0.66 -1.8 5,550,432 - PP_4881 0.66 -0.1 5,550,432 - PP_4881 0.66 -0.7 5,550,432 - PP_4881 0.66 -0.9 5,550,432 - PP_4881 0.66 -0.3 5,550,432 - PP_4881 0.66 -0.8 5,550,434 + PP_4881 0.67 -0.8 5,550,435 - PP_4881 0.67 +0.3 5,550,441 - PP_4881 0.67 -0.6 5,550,485 + PP_4881 0.72 +0.0 5,550,485 + PP_4881 0.72 -0.1 5,550,485 + PP_4881 0.72 +0.1 5,550,485 + PP_4881 0.72 -0.0 5,550,485 + PP_4881 0.72 -0.0 5,550,486 - PP_4881 0.72 -0.6 5,550,486 - PP_4881 0.72 -0.9 5,550,520 + PP_4881 0.75 +0.5 5,550,521 - PP_4881 0.75 +1.1 5,550,521 - PP_4881 0.75 -0.3 5,550,636 - PP_4881 0.86 -0.3 5,550,843 - +0.4 5,550,843 - +0.6 5,550,863 + -0.0 5,550,863 + -0.3 5,550,864 - -0.8 5,550,892 + +0.1 5,550,892 + +0.3 5,550,893 - -0.7 5,550,893 - -0.5 5,550,893 - -0.5 5,550,893 - -0.5 5,551,146 - PP_4882 0.24 -0.3 5,551,146 - PP_4882 0.24 -0.4 5,551,201 + PP_4882 0.27 +0.1 5,551,352 + PP_4882 0.37 -0.1 5,551,368 + PP_4882 0.38 +0.1 5,551,368 + PP_4882 0.38 +0.0 5,551,368 + PP_4882 0.38 -0.2 5,551,368 + PP_4882 0.38 -1.4 5,551,368 + PP_4882 0.38 -0.5 5,551,369 - PP_4882 0.38 +0.1 5,551,369 - PP_4882 0.38 -0.5 5,551,369 - PP_4882 0.38 +0.5 5,551,369 - PP_4882 0.38 +0.6 5,551,369 - PP_4882 0.38 +0.5 5,551,369 - PP_4882 0.38 +2.1 5,551,369 - PP_4882 0.38 +0.4 5,551,429 + PP_4882 0.42 -1.0 5,551,430 - PP_4882 0.42 -0.0 5,551,550 + PP_4882 0.50 -0.5 5,551,550 + PP_4882 0.50 -0.5 5,551,551 - PP_4882 0.50 -0.4 5,551,551 - PP_4882 0.50 +0.7 5,551,551 - PP_4882 0.50 +0.7 5,551,551 - PP_4882 0.50 +0.2 5,551,551 - PP_4882 0.50 -0.1 5,551,568 + PP_4882 0.51 -0.3 5,551,797 + PP_4882 0.65 +0.2 5,551,797 + PP_4882 0.65 +0.1 5,551,797 + PP_4882 0.65 -0.6 5,551,820 - PP_4882 0.67 -0.2 5,551,858 + PP_4882 0.69 -0.3 5,551,859 - PP_4882 0.69 -1.2 5,551,921 + PP_4882 0.73 +0.2 5,551,921 + PP_4882 0.73 -0.2 5,551,921 + PP_4882 0.73 -0.4 5,551,922 - PP_4882 0.73 +1.3 5,551,922 - PP_4882 0.73 -1.0 5,551,922 - PP_4882 0.73 -1.3 5,551,936 + PP_4882 0.74 -1.2 5,551,966 + PP_4882 0.76 +0.9 5,551,967 - PP_4882 0.76 +0.4 5,551,967 - PP_4882 0.76 +0.8 5,552,299 + +0.6 5,552,299 + -0.8 5,552,300 - +0.5 5,552,452 + +0.3 5,552,455 + +0.9 5,552,456 - -0.3 5,552,456 - -0.9 5,552,523 + +0.2 5,552,569 - -0.2 5,552,593 + -0.8 5,552,680 + +0.2 5,552,695 + +0.0 5,552,696 - -0.3 5,552,696 - -0.2 5,552,699 + -0.0 5,552,727 + +0.2 5,552,728 - +0.1 5,552,728 - -0.4 5,552,742 + +0.8 5,552,789 + -0.6 5,552,789 + +1.4 5,552,790 - +0.3 5,552,812 - -1.0 5,552,849 + +0.2 5,552,999 + +0.2 5,553,009 - +0.5 5,553,125 - PP_5717 0.34 -1.0 5,553,219 - PP_5717 0.59 +0.9 5,553,330 + PP_5717 0.89 -0.3 5,553,331 - PP_5717 0.89 -1.2
Or see this region's nucleotide sequence