Strain Fitness in Pseudomonas putida KT2440 around PP_2844

Experiment: mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM
3,247,073	+		PP_2842	0.21	-0.4
3,247,073	+		PP_2842	0.21	+0.4
3,247,073	+		PP_2842	0.21	-0.1
3,247,073	+		PP_2842	0.21	-0.3
3,247,074	-		PP_2842	0.21	-0.0
3,247,074	-		PP_2842	0.21	-0.4
3,247,074	-		PP_2842	0.21	+0.1
3,247,185	-		PP_2842	0.34	-0.1
3,247,500	+		PP_2842	0.72	-0.8
3,247,561	-		PP_2842	0.79	-0.2
3,247,729	+				-0.1
3,247,838	+		PP_2843	0.31	+0.4
3,248,193	+		PP_2844	0.40	-1.1
3,248,194	-		PP_2844	0.40	-1.2
3,248,194	-		PP_2844	0.40	-0.5
3,248,316	+		PP_2844	0.78	-2.0
3,248,337	+		PP_2844	0.85	-0.1
3,248,338	-				+2.4
3,248,338	-		PP_2844	0.85	-0.9
3,248,389	+				+0.1
3,248,495	+				-0.0
3,248,496	-				-0.9
3,249,052	+		PP_2845	0.39	-0.6
3,249,053	-		PP_2845	0.39	+0.9
3,249,196	+		PP_2845	0.48	-0.0
3,249,291	-		PP_2845	0.53	-0.3
3,249,291	-		PP_2845	0.53	-0.9