Experiment: mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0846 and PP_0847 are separated by 3 nucleotides PP_0847 and PP_0848 are separated by 10 nucleotides PP_0848 and PP_0849 are separated by 88 nucleotides PP_0849 and PP_0850 are separated by 28 nucleotides
PP_0846: PP_0846 - DnaK-like molecular chaperone specific for IscU, at 981,124 to 982,986
_0846
PP_0847: PP_0847 - ferredoxin, at 982,990 to 983,331
_0847
PP_0848: PP_0848 - donor of Fe2+ and regulator of cysteine desulfurase activity, at 983,342 to 983,542
_0848
PP_0849: PP_0849 - Nucleoside diphosphate kinase, at 983,631 to 984,056
_0849
PP_0850: PP_0850 - Dual-specificity RNA methyltransferase RlmN, at 984,085 to 985,230
_0850
Position (kb) 983
984 Strain fitness (log2 ratio) -2
-1
0
1
2 at 982.727 kb on + strand, within PP_0846 at 982.727 kb on + strand, within PP_0846 at 982.727 kb on + strand, within PP_0846 at 983.339 kb on + strand at 983.339 kb on + strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.340 kb on - strand at 983.365 kb on - strand, within PP_0848 at 983.417 kb on + strand, within PP_0848 at 983.417 kb on + strand, within PP_0848 at 983.418 kb on - strand, within PP_0848 at 983.418 kb on - strand, within PP_0848 at 983.540 kb on + strand at 983.540 kb on + strand at 983.583 kb on + strand at 983.583 kb on + strand at 984.043 kb on + strand at 984.043 kb on + strand at 984.044 kb on - strand at 984.067 kb on - strand at 984.096 kb on + strand at 984.096 kb on + strand at 984.156 kb on + strand at 984.156 kb on + strand at 984.242 kb on + strand, within PP_0850 at 984.242 kb on + strand, within PP_0850 at 984.242 kb on + strand, within PP_0850 at 984.243 kb on - strand, within PP_0850 at 984.243 kb on - strand, within PP_0850 at 984.333 kb on + strand, within PP_0850 at 984.333 kb on + strand, within PP_0850 at 984.334 kb on - strand, within PP_0850 at 984.379 kb on + strand, within PP_0850 at 984.379 kb on + strand, within PP_0850 at 984.380 kb on - strand, within PP_0850 at 984.380 kb on - strand, within PP_0850
Per-strain Table
Position Strand Gene LocusTag Fraction mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM remove 982,727 + PP_0846 0.86 +1.4 982,727 + PP_0846 0.86 +0.6 982,727 + PP_0846 0.86 +0.1 983,339 + -0.0 983,339 + -1.4 983,340 - -0.6 983,340 - +0.6 983,340 - -0.3 983,340 - +0.6 983,340 - +0.2 983,365 - PP_0848 0.11 +0.2 983,417 + PP_0848 0.37 -0.8 983,417 + PP_0848 0.37 -0.5 983,418 - PP_0848 0.38 -1.5 983,418 - PP_0848 0.38 +0.6 983,540 + -0.6 983,540 + -0.7 983,583 + +1.5 983,583 + +0.7 984,043 + -1.4 984,043 + +1.4 984,044 - +1.8 984,067 - +0.2 984,096 + +2.4 984,096 + +1.4 984,156 + -0.2 984,156 + -0.2 984,242 + PP_0850 0.14 -0.9 984,242 + PP_0850 0.14 -1.9 984,242 + PP_0850 0.14 -0.8 984,243 - PP_0850 0.14 -0.8 984,243 - PP_0850 0.14 +0.6 984,333 + PP_0850 0.22 -0.6 984,333 + PP_0850 0.22 -1.0 984,334 - PP_0850 0.22 +1.4 984,379 + PP_0850 0.26 -1.2 984,379 + PP_0850 0.26 +0.6 984,380 - PP_0850 0.26 +0.5 984,380 - PP_0850 0.26 -0.9
Or see this region's nucleotide sequence