Strain Fitness in Pseudomonas putida KT2440 around PP_0785

Experiment: mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM
899,600	+				+0.7
899,601	-				-0.0
899,778	-				-0.5
899,781	+				-0.4
899,781	+				-0.5
899,871	-				-1.0
899,916	+				+0.4
900,008	+		PP_0784	0.19	+1.2
900,036	-		PP_0784	0.23	-0.1
900,128	-		PP_0784	0.38	+0.4
900,131	+		PP_0784	0.39	+0.2
900,215	-		PP_0784	0.52	+0.0
900,323	-		PP_0784	0.70	-0.2
900,357	+		PP_0784	0.75	+0.5
900,358	-		PP_0784	0.76	+0.2
900,453	+				+0.1
900,453	+				-1.0
900,453	+				-0.2
900,453	+				-1.3
900,454	-				-0.6
900,454	-				+0.8
900,454	-				-0.8
900,454	-				+0.7
900,456	+				+0.2
900,488	+				+0.9
900,489	-				-0.7
900,507	-				-0.6
900,582	+				+0.7
900,583	-				-0.8
900,583	-				+2.7
900,644	+		PP_0785	0.12	+0.7
900,746	+		PP_0785	0.26	+0.5
900,747	-		PP_0785	0.27	+0.6
900,896	-		PP_0785	0.47	+0.2
900,952	+		PP_0785	0.55	+1.0
900,952	+		PP_0785	0.55	+1.2
900,952	+		PP_0785	0.55	-0.2
900,952	+		PP_0785	0.55	+0.5
900,953	-		PP_0785	0.55	+1.5
900,953	-		PP_0785	0.55	+1.4
901,002	+		PP_0785	0.62	+1.3
901,002	+		PP_0785	0.62	+0.8
901,002	+		PP_0785	0.62	+1.5
901,073	+		PP_0785	0.71	+1.1
901,073	+		PP_0785	0.71	-0.0
901,074	-		PP_0785	0.71	+0.3
901,074	-		PP_0785	0.71	-0.8
901,074	-		PP_0785	0.71	+0.9
901,086	+		PP_0785	0.73	+0.2
901,087	-		PP_0785	0.73	+1.6
901,087	-		PP_0785	0.73	+1.4
901,151	+		PP_0785	0.82	-0.6
901,151	+		PP_0785	0.82	+0.4
901,250	+				+2.7
901,251	-				+1.1
901,251	-				+1.3
901,283	+				+0.0
901,283	+				+0.2
901,283	+				+1.0
901,284	-				+0.8
901,284	-				+1.5
901,318	+				+0.9
901,370	+				-0.5
901,370	+				-0.4
901,371	-				+0.8
901,371	-				-0.5
901,371	-				-0.1
901,395	-				-0.8
901,395	-				+1.5
901,413	+				-0.3
901,424	+				+0.0
901,425	-				+0.6
901,425	-				-0.6
901,425	-				+0.7
901,425	-				-1.7
901,425	-				-0.8
901,425	-				+1.1
901,440	+				+0.8
901,454	+				-1.2
901,454	+				+0.3
901,513	+				+1.4