Strain Fitness in Pseudomonas putida KT2440 around PP_4808
Experiment: mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 5,471,915 | - | +0.6 | |||
| 5,471,915 | - | -0.2 | |||
| 5,471,932 | - | -0.1 | |||
| 5,471,965 | - | +0.6 | |||
| 5,471,991 | - | PP_4808 | 0.13 | -0.5 | |
| 5,472,322 | - | PP_4808 | 0.77 | -2.1 | |
| 5,472,322 | - | PP_4808 | 0.77 | +0.2 | |
| 5,472,401 | - | -0.4 | |||
| 5,472,401 | - | +0.9 | |||
| 5,472,697 | + | PP_4809 | 0.71 | +1.3 | |
| 5,472,698 | - | PP_4809 | 0.71 | +0.8 | |
| 5,472,698 | - | PP_4809 | 0.71 | -0.9 | |
| 5,472,821 | - | +0.3 | |||
| 5,472,821 | - | +0.0 | |||
| 5,472,821 | - | -0.1 |
Or see this region's nucleotide sequence