Strain Fitness in Pseudomonas putida KT2440 around PP_2868

Experiment: mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM
3,268,538	+		PP_2867	0.27	-1.4
3,268,538	+		PP_2867	0.27	-0.3
3,268,538	+		PP_2867	0.27	+0.4
3,268,559	+		PP_2867	0.29	-0.9
3,268,742	-		PP_2867	0.44	+0.2
3,268,742	-		PP_2867	0.44	-1.5
3,268,742	-		PP_2867	0.44	+1.1
3,268,849	+		PP_2867	0.53	+0.3
3,268,849	+		PP_2867	0.53	-0.6
3,268,855	+		PP_2867	0.54	-0.5
3,268,882	+		PP_2867	0.56	+0.1
3,268,929	+		PP_2867	0.60	-0.0
3,269,111	+		PP_2867	0.75	-0.9
3,269,247	+				+0.1
3,269,248	-		PP_2867	0.86	+0.1
3,269,248	-		PP_2867	0.86	+0.0
3,269,248	-		PP_2867	0.86	+0.6
3,269,452	+				-0.4
3,269,453	-				+0.2
3,269,453	-				-0.5
3,269,472	-				+0.3
3,269,472	-				-0.6
3,269,472	-				-1.2
3,269,680	+		PP_2868	0.31	-0.5
3,269,680	+		PP_2868	0.31	+0.0
3,269,680	+		PP_2868	0.31	-0.3
3,269,681	-		PP_2868	0.31	-1.3
3,269,695	+		PP_2868	0.34	-3.2
3,269,695	+		PP_2868	0.34	+0.0
3,269,695	+		PP_2868	0.34	-0.7
3,269,782	+		PP_2868	0.48	+0.6
3,269,782	+		PP_2868	0.48	-0.0
3,269,782	+		PP_2868	0.48	-0.5
3,269,818	+		PP_2868	0.54	-0.5
3,269,818	+		PP_2868	0.54	-0.8
3,269,819	-		PP_2868	0.54	-1.1
3,269,819	-		PP_2868	0.54	-2.8
3,269,819	-		PP_2868	0.54	-1.1
3,269,951	-		PP_2868	0.76	-1.4
3,270,121	+				+0.5
3,270,121	+				-0.3
3,270,121	+				-0.5
3,270,121	+				-0.4
3,270,121	+				-0.1
3,270,121	+				-0.4
3,270,122	-				-0.4
3,270,122	-				-0.0
3,270,125	+				+0.8
3,270,125	+				-0.9
3,270,213	+				+0.5
3,270,214	-				+1.2
3,270,214	-				-2.8
3,270,423	+		PP_2869	0.15	+0.4
3,270,423	+		PP_2869	0.15	+0.4
3,270,423	+		PP_2869	0.15	-0.0
3,270,424	-		PP_2869	0.15	-0.3
3,270,428	-		PP_2869	0.15	+0.1
3,270,428	-		PP_2869	0.15	-0.6
3,270,428	-		PP_2869	0.15	-0.3
3,270,601	-		PP_2869	0.24	+0.4
3,270,637	+		PP_2869	0.26	-0.4
3,270,726	+		PP_2869	0.30	+0.4
3,270,726	+		PP_2869	0.30	+0.3
3,270,727	-		PP_2869	0.30	+0.6
3,270,727	-		PP_2869	0.30	-0.1
3,270,727	-		PP_2869	0.30	+0.4
3,270,727	-		PP_2869	0.30	+0.4
3,270,761	+		PP_2869	0.32	-0.8
3,270,796	-		PP_2869	0.34	-0.7
3,270,807	+		PP_2869	0.35	+0.3
3,270,808	-		PP_2869	0.35	+0.5
3,270,808	-		PP_2869	0.35	-0.4
3,270,956	-		PP_2869	0.42	+0.0