Strain Fitness in Pseudomonas putida KT2440 around PP_2770

Experiment: mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM
3,152,909	+		PP_2769	0.17	-0.7
3,152,910	-		PP_2769	0.17	+0.9
3,152,910	-		PP_2769	0.17	-1.0
3,152,996	+		PP_2769	0.26	+0.0
3,153,013	+		PP_2769	0.28	+0.6
3,153,014	-		PP_2769	0.28	+0.6
3,153,015	+		PP_2769	0.28	-0.8
3,153,133	+		PP_2769	0.40	+0.1
3,153,134	-		PP_2769	0.40	-0.0
3,153,377	-		PP_2769	0.64	+0.1
3,153,412	+		PP_2769	0.68	-0.5
3,153,413	-		PP_2769	0.68	+0.5
3,153,481	-		PP_2769	0.75	+0.1
3,153,603	-		PP_2769	0.87	-0.2
3,153,603	-		PP_2769	0.87	-0.1
3,153,782	+				-0.8
3,153,788	-				+1.5
3,153,843	+				+1.0
3,153,843	+				+0.3
3,153,843	+				-0.1
3,153,844	-				+0.2
3,153,844	-				-0.4
3,153,885	-				-1.8
3,153,885	-				-0.3
3,153,918	-				-0.1
3,153,918	-				-0.3
3,153,918	-				-0.3
3,153,959	+		PP_2770	0.12	+0.3
3,153,968	+		PP_2770	0.13	+0.5
3,154,059	-		PP_2770	0.20	-1.1
3,154,130	+		PP_2770	0.25	-0.4
3,154,131	-		PP_2770	0.25	-1.1
3,154,223	+		PP_2770	0.32	-0.2
3,154,224	-		PP_2770	0.32	-1.1
3,154,224	-		PP_2770	0.32	-0.4
3,154,261	-		PP_2770	0.35	-0.8
3,154,398	-		PP_2770	0.45	-0.6
3,154,398	-		PP_2770	0.45	-1.3
3,154,754	+		PP_2770	0.72	-0.3
3,154,757	+		PP_2770	0.72	-2.1
3,154,758	-		PP_2770	0.72	+0.2
3,154,758	-		PP_2770	0.72	-1.5
3,154,758	-		PP_2770	0.72	-0.4
3,154,935	+		PP_2770	0.86	+0.0
3,155,072	+				+0.7
3,155,072	+				+0.3
3,155,072	+				-0.3
3,155,090	-				+0.4
3,155,093	-				+0.3
3,155,168	+				+0.1
3,155,169	-				-0.1
3,155,169	-				-0.8
3,155,331	-		PP_2771	0.16	+0.8
3,155,569	-		PP_2771	0.37	+0.1
3,155,569	-		PP_2771	0.37	+0.6
3,155,607	-		PP_2771	0.41	+0.5
3,155,617	-		PP_2771	0.41	+0.3
3,155,695	-		PP_2771	0.49	+0.1
3,155,725	-		PP_2771	0.51	-0.5
3,155,727	+		PP_2771	0.51	+0.8
3,155,727	+		PP_2771	0.51	+0.7
3,155,728	-		PP_2771	0.52	-0.6
3,155,728	-		PP_2771	0.52	-0.5
3,156,077	+		PP_2771	0.83	+0.1
3,156,077	+		PP_2771	0.83	-1.1
3,156,077	+		PP_2771	0.83	-0.2
3,156,078	-		PP_2771	0.83	-0.0