Strain Fitness in Pseudomonas putida KT2440 around PP_0841

Experiment: mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM
977,072	+				+0.5
977,073	-				+0.8
977,083	+				+0.1
977,084	-				+0.7
977,298	-		PP_0840	0.32	+0.4
977,522	+		PP_0840	0.60	-1.2
977,588	+		PP_0840	0.69	+1.4
977,622	+		PP_0840	0.73	-1.1
977,714	+		PP_0840	0.85	-0.6
977,715	-		PP_0840	0.85	-0.4
977,715	-		PP_0840	0.85	-0.4
977,715	-		PP_0840	0.85	+1.5
977,715	-		PP_0840	0.85	+0.2
977,748	+		PP_0840	0.89	-0.6
977,748	+		PP_0840	0.89	+0.5
977,749	-		PP_0840	0.89	-0.8
977,749	-		PP_0840	0.89	+1.0
977,749	-		PP_0840	0.89	-1.0
977,749	-		PP_0840	0.89	+1.3
978,009	+				+0.1
978,206	+		PP_0841	0.39	-2.2
978,384	+		PP_0841	0.75	-0.3
978,384	+		PP_0841	0.75	-1.1
978,384	+		PP_0841	0.75	-0.4
978,384	+		PP_0841	0.75	-2.2
978,384	+		PP_0841	0.75	-1.4
978,539	+				-0.0
978,539	+				-0.9