Strain Fitness in Pseudomonas putida KT2440 around PP_2407

Experiment: mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM
2,749,500	-				+0.0
2,749,500	-				-1.1
2,749,581	+				-1.0
2,749,595	+				-0.5
2,749,595	+				-1.4
2,749,596	-				+1.0
2,749,596	-				-2.4
2,749,639	+				+0.5
2,749,807	+		PP_2406	0.20	+1.2
2,749,808	-		PP_2406	0.20	+0.0
2,749,808	-		PP_2406	0.20	+0.4
2,749,870	-		PP_2406	0.27	-0.6
2,750,037	+		PP_2406	0.47	+0.9
2,750,038	-		PP_2406	0.47	-0.2
2,750,278	+		PP_2406	0.75	-1.5
2,750,278	+		PP_2406	0.75	-0.3
2,750,282	+		PP_2406	0.76	+0.2
2,750,282	+		PP_2406	0.76	+0.2
2,750,283	-		PP_2406	0.76	+0.4
2,750,433	-				-1.0
2,750,866	-		PP_2407	0.84	-0.8
2,751,065	+				-0.2
2,751,159	+				+0.9
2,751,160	-				+1.0
2,751,675	-		PP_2408	0.39	-0.2
2,751,778	-		PP_2408	0.47	-1.1