Strain Fitness in Escherichia coli BW25113 around b0076

Experiment: Mixed culture; Bdellovibrio bacteriovorus HD100 1:10 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture; Bdellovibrio bacteriovorus HD100 1:10 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan
83,465	-				+0.6
83,465	-				-0.1
83,470	+				+0.3
83,486	-				-0.1
83,525	+				-0.0
83,525	-				-0.3
83,547	+				-0.4
83,557	+				+0.8
83,561	+				-0.2
83,610	+				-0.1
83,619	+				-0.2
83,620	+				-0.3
83,620	+				+0.3
83,620	+				+0.4
83,622	-				+0.4
83,625	+				+0.2
83,627	-				+0.1
83,627	-				+0.1
83,627	-				-0.2
83,627	-				+0.3
83,635	-	leuL	b0075	0.15	-0.9
83,640	+	leuL	b0075	0.21	-0.4
83,640	+	leuL	b0075	0.21	+0.2
83,642	+	leuL	b0075	0.23	-0.3
83,642	+	leuL	b0075	0.23	-0.7
83,643	-	leuL	b0075	0.24	+0.0
83,643	-	leuL	b0075	0.24	-0.0
83,644	+	leuL	b0075	0.25	+0.1
83,645	-	leuL	b0075	0.26	+0.2
83,650	-	leuL	b0075	0.32	-0.4
83,650	-	leuL	b0075	0.32	-0.7
83,650	-	leuL	b0075	0.32	+0.2
83,650	-	leuL	b0075	0.32	+0.3
83,660	-	leuL	b0075	0.44	+0.6
83,660	-	leuL	b0075	0.44	+0.7
83,675	+	leuL	b0075	0.61	+0.2
83,675	+	leuL	b0075	0.61	-0.1
83,675	+	leuL	b0075	0.61	+0.5
83,675	+	leuL	b0075	0.61	+0.2
83,675	+	leuL	b0075	0.61	-0.7
83,675	+	leuL	b0075	0.61	-0.8
83,676	-	leuL	b0075	0.62	+0.3
83,683	-	leuL	b0075	0.70	-0.0
83,683	-	leuL	b0075	0.70	-0.2
83,683	-	leuL	b0075	0.70	-0.3
83,683	-	leuL	b0075	0.70	-0.7
83,683	-	leuL	b0075	0.70	+0.7
83,683	-	leuL	b0075	0.70	+0.5
83,683	-	leuL	b0075	0.70	+0.1
83,691	-	leuL	b0075	0.79	-0.1
83,691	-	leuL	b0075	0.79	+0.1
83,704	-				+0.6
83,706	-				-0.1
83,717	+				+0.1
83,730	+				+0.0
83,730	+				+0.2
83,730	-				+0.1
83,745	-				-0.6
83,772	+				+0.1
83,772	+				-0.5
83,774	-				-0.7
83,774	-				+1.2
83,832	+				-0.6
83,832	+				-0.4
83,897	+				-1.9
83,920	+				+1.3
83,950	+				+1.9
83,959	+				-0.1
83,959	+				-0.7
83,959	+				-0.1
83,959	+				-0.3
83,959	+				-0.8
83,959	+				+0.8
84,187	+				+1.9
84,199	+				+1.9
84,199	+				+1.9
84,348	+				+0.9
84,354	-				+1.3
84,354	-				-1.9
84,362	-				+0.2
84,364	-				-0.4
84,364	-				-1.4
84,367	-				-0.7
84,369	-				+0.4
84,370	+				+0.9
84,380	+				+1.9
84,384	-				+1.9
84,384	-				+0.6
84,384	-				-0.4
84,384	-				-0.8
84,384	-				-0.7
84,393	-				+0.7
84,398	-				+0.7
84,412	-				-0.0
84,414	+				+0.6
84,414	+				-1.1
84,414	+				+1.2
84,414	+				-0.1
84,414	-				+0.5
84,414	-				+1.3
84,419	+				-1.8
84,422	-				-0.9
84,424	+				-0.4
84,424	+				+1.7
84,425	+				-0.1
84,429	-				-0.7
84,429	-				-0.5
84,432	-				+0.2
84,432	-				+0.1
84,432	-				-0.2
84,433	-				-0.7
84,442	-				+0.6
84,443	-				+0.3
84,443	-				-1.8
84,469	-	leuO	b0076	0.11	-0.9
84,480	+	leuO	b0076	0.12	+1.5
84,480	+	leuO	b0076	0.12	-0.4
84,480	+	leuO	b0076	0.12	+0.4
84,480	+	leuO	b0076	0.12	-1.6
84,484	+	leuO	b0076	0.12	+2.3
84,484	+	leuO	b0076	0.12	-0.8
84,486	-	leuO	b0076	0.12	-2.0
84,486	-	leuO	b0076	0.12	+1.3
84,488	-	leuO	b0076	0.13	-0.9
84,488	-	leuO	b0076	0.13	-0.5
84,488	-	leuO	b0076	0.13	+0.4
84,508	-	leuO	b0076	0.15	-0.9
84,515	-	leuO	b0076	0.16	-0.9
84,515	-	leuO	b0076	0.16	-0.3
84,531	+	leuO	b0076	0.17	-0.7
84,531	+	leuO	b0076	0.17	+0.3
84,534	+	leuO	b0076	0.18	-0.6
84,534	-	leuO	b0076	0.18	+1.9
84,534	-	leuO	b0076	0.18	+0.3
84,539	-	leuO	b0076	0.18	+0.0
84,544	+	leuO	b0076	0.19	-0.2
84,544	-	leuO	b0076	0.19	+0.9
84,552	-	leuO	b0076	0.19	-0.1
84,552	-	leuO	b0076	0.19	+0.3
84,556	+	leuO	b0076	0.20	-0.2
84,591	+	leuO	b0076	0.24	-0.3
84,591	+	leuO	b0076	0.24	+0.0
84,591	+	leuO	b0076	0.24	+0.1
84,593	-	leuO	b0076	0.24	+1.9
84,599	-	leuO	b0076	0.24	+1.9
84,603	-	leuO	b0076	0.25	+0.9
84,635	+	leuO	b0076	0.28	-0.8
84,635	+	leuO	b0076	0.28	-1.2
84,644	-	leuO	b0076	0.29	+1.9
84,648	+	leuO	b0076	0.30	+0.2
84,648	+	leuO	b0076	0.30	+0.1
84,648	+	leuO	b0076	0.30	+0.1
84,648	+	leuO	b0076	0.30	+0.1
84,658	-	leuO	b0076	0.31	-0.1
84,658	-	leuO	b0076	0.31	+0.6
84,671	+	leuO	b0076	0.32	-0.1
84,696	+	leuO	b0076	0.35	-0.2
84,696	+	leuO	b0076	0.35	-0.1
84,728	+	leuO	b0076	0.38	-0.1
84,728	+	leuO	b0076	0.38	+0.1
84,728	+	leuO	b0076	0.38	-0.5
84,728	+	leuO	b0076	0.38	-0.1
84,731	+	leuO	b0076	0.38	-0.4
84,736	-	leuO	b0076	0.39	+1.3
84,736	-	leuO	b0076	0.39	-0.8
84,769	+	leuO	b0076	0.42	-0.3
84,786	+	leuO	b0076	0.44	+0.7
84,786	+	leuO	b0076	0.44	-0.0
84,799	+	leuO	b0076	0.46	+0.2
84,799	+	leuO	b0076	0.46	+0.1
84,805	-	leuO	b0076	0.46	+1.6
84,805	-	leuO	b0076	0.46	-2.1
84,825	+	leuO	b0076	0.48	+0.7
84,825	-	leuO	b0076	0.48	-0.9
84,827	+	leuO	b0076	0.49	-0.2
84,827	+	leuO	b0076	0.49	-0.8
84,851	-	leuO	b0076	0.51	-0.3
84,859	+	leuO	b0076	0.52	-0.2
84,867	+	leuO	b0076	0.53	+0.1
84,875	-	leuO	b0076	0.54	+1.9
84,900	-	leuO	b0076	0.56	-0.8
84,918	+	leuO	b0076	0.58	+0.3
84,918	+	leuO	b0076	0.58	+0.2
84,922	-	leuO	b0076	0.59	-0.1
84,947	-	leuO	b0076	0.61	-0.3
84,947	-	leuO	b0076	0.61	-1.5
84,975	-	leuO	b0076	0.64	-0.4
84,975	-	leuO	b0076	0.64	-0.1
84,978	-	leuO	b0076	0.65	-0.7
84,978	-	leuO	b0076	0.65	-0.3
84,990	-	leuO	b0076	0.66	-0.2
85,019	-	leuO	b0076	0.69	-1.4
85,028	+	leuO	b0076	0.70	-1.1
85,028	+	leuO	b0076	0.70	-0.7
85,037	-	leuO	b0076	0.71	+0.1
85,040	+	leuO	b0076	0.71	-0.2
85,045	+	leuO	b0076	0.72	+0.1
85,045	+	leuO	b0076	0.72	+0.4
85,048	-	leuO	b0076	0.72	-0.1
85,049	+	leuO	b0076	0.72	+0.0
85,050	+	leuO	b0076	0.72	-0.3
85,051	-	leuO	b0076	0.72	+0.7
85,051	-	leuO	b0076	0.72	-1.1
85,055	+	leuO	b0076	0.73	-0.0
85,055	+	leuO	b0076	0.73	-0.4
85,055	+	leuO	b0076	0.73	-0.4
85,058	-	leuO	b0076	0.73	+0.4
85,063	-	leuO	b0076	0.74	+0.2
85,063	-	leuO	b0076	0.74	+0.6
85,063	-	leuO	b0076	0.74	-0.3
85,064	-	leuO	b0076	0.74	-1.0
85,065	-	leuO	b0076	0.74	-1.3
85,066	+	leuO	b0076	0.74	-0.2
85,068	+	leuO	b0076	0.74	+0.3
85,069	-	leuO	b0076	0.74	-0.5
85,070	+	leuO	b0076	0.74	+0.5
85,071	+	leuO	b0076	0.74	+0.0
85,071	+	leuO	b0076	0.74	-0.0
85,071	+	leuO	b0076	0.74	+0.2
85,074	-	leuO	b0076	0.75	+0.1
85,076	+	leuO	b0076	0.75	+0.3
85,076	-	leuO	b0076	0.75	+0.4
85,076	-	leuO	b0076	0.75	+0.1
85,077	+	leuO	b0076	0.75	-0.6
85,079	+	leuO	b0076	0.75	-0.2
85,079	+	leuO	b0076	0.75	+0.2
85,079	-	leuO	b0076	0.75	-1.6
85,086	+	leuO	b0076	0.76	+0.5
85,086	+	leuO	b0076	0.76	+0.0
85,087	-	leuO	b0076	0.76	+0.8
85,087	-	leuO	b0076	0.76	-0.3
85,087	-	leuO	b0076	0.76	-0.3
85,098	+	leuO	b0076	0.77	+0.1
85,098	+	leuO	b0076	0.77	+0.1
85,098	+	leuO	b0076	0.77	-0.1
85,099	-	leuO	b0076	0.77	+0.3
85,099	-	leuO	b0076	0.77	-0.1
85,099	-	leuO	b0076	0.77	-0.1
85,102	-	leuO	b0076	0.78	-1.1
85,104	+	leuO	b0076	0.78	-0.1
85,104	+	leuO	b0076	0.78	-0.4
85,104	+	leuO	b0076	0.78	-0.3
85,104	+	leuO	b0076	0.78	+0.3
85,104	+	leuO	b0076	0.78	+0.1
85,104	+	leuO	b0076	0.78	-0.0
85,104	+	leuO	b0076	0.78	-0.0
85,105	+	leuO	b0076	0.78	-0.3
85,105	+	leuO	b0076	0.78	-0.3
85,108	-	leuO	b0076	0.78	-0.2
85,108	-	leuO	b0076	0.78	-1.2
85,108	-	leuO	b0076	0.78	+0.7
85,108	-	leuO	b0076	0.78	+0.2
85,110	+	leuO	b0076	0.79	-0.4
85,112	-	leuO	b0076	0.79	+0.9
85,112	-	leuO	b0076	0.79	-0.2
85,112	-	leuO	b0076	0.79	-1.2
85,137	+	leuO	b0076	0.81	-0.6
85,137	+	leuO	b0076	0.81	+0.8
85,137	+	leuO	b0076	0.81	-0.4
85,137	+	leuO	b0076	0.81	+0.2
85,145	-	leuO	b0076	0.82	+1.9
85,145	-	leuO	b0076	0.82	+0.9
85,147	+	leuO	b0076	0.82	+0.0
85,157	+	leuO	b0076	0.83	+0.5
85,157	+	leuO	b0076	0.83	+0.0
85,157	+	leuO	b0076	0.83	-0.3
85,157	+	leuO	b0076	0.83	-0.4
85,216	-	leuO	b0076	0.90	+1.9
85,224	+				-0.1
85,224	+				-0.5
85,224	-				+1.9
85,227	+				-1.2
85,227	+				-0.4
85,234	+				+0.7
85,234	+				-0.5
85,234	+				+0.3
85,234	+				+0.2
85,240	+				+0.4
85,250	+				-0.1
85,250	+				+0.3
85,259	+				+0.4
85,266	-				+0.7
85,273	+				-0.5
85,277	+				-0.0
85,292	+				+0.5
85,327	+				+0.0
85,327	+				+0.2
85,327	+				-0.2
85,332	+				+0.5
85,332	+				-0.1
85,334	+				-0.0
85,388	+				-0.2
85,388	+				+0.4
85,548	-				-0.4
85,548	-				-0.6
85,582	-				-0.1
85,582	-				+0.4
85,584	+				-1.1
85,592	-				-0.1
85,620	+				+0.8
85,623	-				-0.4
85,626	+				+1.0
85,626	+				+0.6
85,626	+				+0.6
85,626	+				+0.9
85,626	-				-0.1
85,627	+				-0.2
85,627	+				-0.1
85,634	-				-0.2
85,634	-				+0.4
85,634	-				+0.4
85,634	-				-0.2
85,635	-				-0.2
85,635	-				+0.4
85,635	-				-0.2
85,635	-				-0.1
85,636	-				+0.2
85,638	-				-0.6
85,643	-				+0.1
85,643	-				+0.1
85,646	-				+0.1
85,646	-				-0.2
85,649	-				+0.3
85,649	-				-0.3
85,725	-				-0.3
85,725	-				+0.2
85,738	+				+0.4
85,738	+				+0.4
85,745	-				+0.1
85,745	-				-0.2
85,757	-				-0.5
85,765	+				+0.3
85,793	-				-0.7
85,794	-				-0.9
85,802	-				+0.0
85,802	-				+0.3
85,802	-				+0.5
85,802	-				+0.3
85,815	-	ilvI	b0077	0.11	+0.9
85,815	-	ilvI	b0077	0.11	-0.6
85,830	+	ilvI	b0077	0.12	+0.1
85,856	+	ilvI	b0077	0.13	-0.4
85,856	+	ilvI	b0077	0.13	+0.3
85,864	-	ilvI	b0077	0.14	-0.6
85,931	+	ilvI	b0077	0.17	+0.1
85,937	+	ilvI	b0077	0.18	-0.2
86,112	+	ilvI	b0077	0.28	-0.2