Strain Fitness in Escherichia coli BW25113 around b3088

Experiment: 18 hr rep1_HD100_no_dilution

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	18 hr rep1_HD100_no_dilution
3,235,649	+	ygjR	b3087	0.32	+0.6
3,235,746	-	ygjR	b3087	0.42	-0.3
3,235,746	-	ygjR	b3087	0.42	-0.7
3,235,848	+	ygjR	b3087	0.52	+0.5
3,235,910	-	ygjR	b3087	0.58	+0.4
3,235,910	-	ygjR	b3087	0.58	-0.8
3,235,958	+	ygjR	b3087	0.63	+0.2
3,235,983	+	ygjR	b3087	0.66	+0.7
3,236,005	+	ygjR	b3087	0.68	+0.1
3,236,005	+	ygjR	b3087	0.68	+0.3
3,236,035	+	ygjR	b3087	0.71	+0.7
3,236,066	+	ygjR	b3087	0.74	+0.1
3,236,068	-	ygjR	b3087	0.74	-0.0
3,236,185	-	ygjR	b3087	0.86	+0.2
3,236,222	+				-0.7
3,236,230	-				+0.2
3,236,230	-				-0.2
3,236,241	+				+0.3
3,236,241	+				+0.3
3,236,274	+				-0.2
3,236,429	+				+0.1
3,236,429	+				-0.3
3,236,508	+				-0.7
3,236,563	+				+0.2
3,236,563	+				+1.4
3,236,607	-				-0.7
3,236,620	+				-1.0
3,236,620	+				-0.8
3,236,672	-				-1.8
3,236,701	+	alx	b3088	0.10	-0.8
3,236,703	+	alx	b3088	0.10	-0.2
3,236,747	-	alx	b3088	0.15	-2.0
3,236,752	-	alx	b3088	0.16	-1.0
3,236,763	+	alx	b3088	0.17	-2.5
3,236,763	+	alx	b3088	0.17	-3.3
3,236,763	-	alx	b3088	0.17	-2.1
3,236,763	-	alx	b3088	0.17	-1.0
3,236,773	+	alx	b3088	0.18	-2.9
3,236,773	+	alx	b3088	0.18	-3.6
3,236,783	+	alx	b3088	0.19	-1.5
3,236,784	-	alx	b3088	0.19	-1.9
3,236,816	+	alx	b3088	0.22	-2.0
3,236,816	+	alx	b3088	0.22	-2.1
3,236,946	+	alx	b3088	0.36	-1.7
3,236,961	-	alx	b3088	0.37	-1.5
3,236,993	+	alx	b3088	0.40	-1.8
3,236,993	+	alx	b3088	0.40	-1.5
3,237,052	-	alx	b3088	0.47	-2.5
3,237,083	+	alx	b3088	0.50	-1.7
3,237,149	+	alx	b3088	0.57	-2.0
3,237,152	-	alx	b3088	0.57	-2.3
3,237,199	+	alx	b3088	0.62	-1.4
3,237,203	+	alx	b3088	0.62	-1.5
3,237,293	+	alx	b3088	0.72	-1.3
3,237,301	-	alx	b3088	0.72	-1.1
3,237,301	-	alx	b3088	0.72	-1.7
3,237,318	-	alx	b3088	0.74	-3.2
3,237,318	-	alx	b3088	0.74	-0.2
3,237,325	-	alx	b3088	0.75	-0.7
3,237,382	-	alx	b3088	0.81	-2.4
3,237,416	+	alx	b3088	0.84	-2.6
3,237,416	+	alx	b3088	0.84	-1.7
3,237,421	+	alx	b3088	0.85	-2.9
3,237,431	+	alx	b3088	0.86	-2.8
3,237,505	-				-0.9
3,237,586	+				-0.1
3,237,586	+				-0.6
3,237,586	-				+0.0
3,237,586	-				-0.6
3,237,629	+				+0.2
3,237,629	+				+1.2
3,237,631	+				+0.1
3,237,719	-				+0.3
3,237,720	-				-0.3
3,237,720	-				-0.4
3,237,754	+				+0.9
3,237,754	+				-0.2
3,237,763	-				-1.0
3,237,808	-				+0.2
3,237,882	+				+0.6
3,237,904	-				-0.0
3,237,935	-				+0.3
3,237,935	-				+0.1
3,237,935	-				+0.9
3,238,000	-				+1.1
3,238,000	-				-0.3
3,238,005	+				+0.7
3,238,008	-				+0.2
3,238,039	+				-0.2
3,238,039	+				-1.0
3,238,039	+				+0.7
3,238,039	+				+0.1
3,238,064	-				-0.5
3,238,144	+	sstT	b3089	0.14	-0.0
3,238,144	+	sstT	b3089	0.14	+0.2
3,238,160	+	sstT	b3089	0.16	-0.2
3,238,232	+	sstT	b3089	0.21	-1.4
3,238,233	-	sstT	b3089	0.21	-0.0
3,238,233	-	sstT	b3089	0.21	+0.4
3,238,246	+	sstT	b3089	0.22	-0.3
3,238,259	-	sstT	b3089	0.24	+0.3
3,238,259	-	sstT	b3089	0.24	+0.4
3,238,291	-	sstT	b3089	0.26	+0.5
3,238,357	+	sstT	b3089	0.31	+0.5
3,238,365	-	sstT	b3089	0.32	+0.4
3,238,374	+	sstT	b3089	0.33	-0.4
3,238,395	+	sstT	b3089	0.34	+0.1
3,238,397	+	sstT	b3089	0.35	+0.4
3,238,419	+	sstT	b3089	0.36	+0.2
3,238,430	-	sstT	b3089	0.37	+0.5
3,238,430	-	sstT	b3089	0.37	-0.1
3,238,484	+	sstT	b3089	0.42	+0.1
3,238,484	+	sstT	b3089	0.42	+0.6
3,238,492	-	sstT	b3089	0.42	+0.5