Strain Fitness in Escherichia coli BW25113 around b2371

Experiment: 18 hr NoPredatorControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntevgS and yfdE are separated by 55 nucleotidesyfdE and yfdV are separated by 73 nucleotides b2370: evgS - hybrid sensory histidine kinase in two-component regulatory system with EvgA (NCBI), at 2,482,396 to 2,485,989 evgS b2371: yfdE - putative enzyme (VIMSS), at 2,486,045 to 2,487,190 yfdE b2372: yfdV - predicted transporter (NCBI), at 2,487,264 to 2,488,208 yfdV Position (kb) 2486 2487 2488Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2485.047 kb on + strand, within evgSat 2485.051 kb on + strand, within evgSat 2485.054 kb on + strand, within evgSat 2485.065 kb on + strand, within evgSat 2485.065 kb on + strand, within evgSat 2485.086 kb on + strand, within evgSat 2485.090 kb on - strand, within evgSat 2485.091 kb on + strand, within evgSat 2485.102 kb on + strand, within evgSat 2485.111 kb on - strand, within evgSat 2485.183 kb on - strand, within evgSat 2485.183 kb on - strand, within evgSat 2485.190 kb on + strand, within evgSat 2485.193 kb on - strand, within evgSat 2485.243 kb on + strand, within evgSat 2485.246 kb on - strand, within evgSat 2485.248 kb on + strand, within evgSat 2485.317 kb on - strand, within evgSat 2485.343 kb on - strand, within evgSat 2485.354 kb on - strand, within evgSat 2485.360 kb on + strand, within evgSat 2485.364 kb on - strand, within evgSat 2485.365 kb on - strand, within evgSat 2485.369 kb on + strand, within evgSat 2485.369 kb on + strand, within evgSat 2485.375 kb on - strand, within evgSat 2485.375 kb on - strand, within evgSat 2485.375 kb on - strand, within evgSat 2485.378 kb on + strand, within evgSat 2485.389 kb on - strand, within evgSat 2485.391 kb on + strand, within evgSat 2485.391 kb on + strand, within evgSat 2485.393 kb on - strand, within evgSat 2485.400 kb on + strand, within evgSat 2485.458 kb on - strand, within evgSat 2485.459 kb on + strand, within evgSat 2485.465 kb on - strand, within evgSat 2485.465 kb on - strand, within evgSat 2485.492 kb on + strand, within evgSat 2485.493 kb on + strand, within evgSat 2485.507 kb on + strand, within evgSat 2485.507 kb on + strand, within evgSat 2485.507 kb on + strand, within evgSat 2485.512 kb on + strand, within evgSat 2485.516 kb on + strand, within evgSat 2485.516 kb on - strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.518 kb on + strand, within evgSat 2485.526 kb on - strand, within evgSat 2485.526 kb on - strand, within evgSat 2485.538 kb on + strand, within evgSat 2485.538 kb on + strand, within evgSat 2485.556 kb on + strand, within evgSat 2485.564 kb on - strand, within evgSat 2485.565 kb on + strand, within evgSat 2485.580 kb on + strand, within evgSat 2485.580 kb on - strand, within evgSat 2485.584 kb on + strand, within evgSat 2485.588 kb on - strand, within evgSat 2485.588 kb on - strand, within evgSat 2485.611 kb on + strand, within evgSat 2485.611 kb on + strand, within evgSat 2485.629 kb on - strand, within evgSat 2485.629 kb on - strand, within evgSat 2485.647 kb on - strandat 2485.651 kb on - strandat 2485.688 kb on + strandat 2485.688 kb on + strandat 2485.688 kb on + strandat 2485.688 kb on + strandat 2485.688 kb on + strandat 2485.688 kb on + strandat 2485.693 kb on + strandat 2485.693 kb on + strandat 2485.700 kb on + strandat 2485.700 kb on + strandat 2485.707 kb on - strandat 2485.718 kb on + strandat 2485.725 kb on - strandat 2485.728 kb on - strandat 2485.763 kb on + strandat 2485.763 kb on - strandat 2485.765 kb on + strandat 2485.765 kb on + strandat 2485.765 kb on + strandat 2485.765 kb on + strandat 2485.765 kb on + strandat 2485.765 kb on + strandat 2485.773 kb on - strandat 2485.773 kb on - strandat 2485.797 kb on + strandat 2485.799 kb on + strandat 2485.806 kb on - strandat 2485.809 kb on + strandat 2485.809 kb on + strandat 2485.809 kb on + strandat 2485.866 kb on + strandat 2485.893 kb on + strandat 2485.893 kb on + strandat 2485.907 kb on - strandat 2485.917 kb on + strandat 2485.922 kb on + strandat 2485.925 kb on + strandat 2485.925 kb on + strandat 2485.945 kb on + strandat 2485.945 kb on + strandat 2485.945 kb on + strandat 2485.947 kb on + strandat 2485.947 kb on + strandat 2485.955 kb on + strandat 2485.988 kb on + strandat 2485.999 kb on + strandat 2486.000 kb on + strandat 2486.024 kb on + strandat 2486.024 kb on + strandat 2486.030 kb on - strandat 2486.032 kb on - strandat 2486.032 kb on - strandat 2486.045 kb on - strandat 2486.067 kb on - strandat 2486.067 kb on - strandat 2486.076 kb on - strandat 2486.081 kb on + strandat 2486.086 kb on - strandat 2486.087 kb on - strandat 2486.091 kb on - strandat 2486.092 kb on + strandat 2486.102 kb on + strandat 2486.102 kb on + strandat 2486.102 kb on + strandat 2486.110 kb on - strandat 2486.110 kb on - strandat 2486.112 kb on - strandat 2486.120 kb on - strandat 2486.124 kb on - strandat 2486.143 kb on + strandat 2486.226 kb on - strand, within yfdEat 2486.226 kb on - strand, within yfdEat 2486.262 kb on + strand, within yfdEat 2486.284 kb on - strand, within yfdEat 2486.284 kb on - strand, within yfdEat 2486.326 kb on - strand, within yfdEat 2486.378 kb on - strand, within yfdEat 2486.380 kb on - strand, within yfdEat 2486.383 kb on - strand, within yfdEat 2486.388 kb on - strand, within yfdEat 2486.388 kb on - strand, within yfdEat 2486.397 kb on - strand, within yfdEat 2486.405 kb on - strand, within yfdEat 2486.405 kb on - strand, within yfdEat 2486.405 kb on - strand, within yfdEat 2486.405 kb on - strand, within yfdEat 2486.460 kb on - strand, within yfdEat 2486.466 kb on - strand, within yfdEat 2486.466 kb on - strand, within yfdEat 2486.516 kb on - strand, within yfdEat 2486.542 kb on - strand, within yfdEat 2486.542 kb on - strand, within yfdEat 2486.547 kb on - strand, within yfdEat 2486.547 kb on - strand, within yfdEat 2486.552 kb on - strand, within yfdEat 2486.621 kb on + strand, within yfdEat 2486.674 kb on - strand, within yfdEat 2486.674 kb on - strand, within yfdEat 2486.674 kb on - strand, within yfdEat 2486.682 kb on - strand, within yfdEat 2486.689 kb on - strand, within yfdEat 2486.689 kb on - strand, within yfdEat 2486.689 kb on - strand, within yfdEat 2486.699 kb on - strand, within yfdEat 2486.701 kb on - strand, within yfdEat 2486.719 kb on - strandat 2486.728 kb on + strand, within yfdEat 2486.728 kb on + strand, within yfdEat 2486.754 kb on + strand, within yfdEat 2486.765 kb on + strand, within yfdEat 2486.765 kb on + strand, within yfdEat 2486.783 kb on - strand, within yfdEat 2486.789 kb on + strand, within yfdEat 2486.830 kb on + strand, within yfdEat 2486.830 kb on + strand, within yfdEat 2487.014 kb on - strand, within yfdEat 2487.016 kb on + strand, within yfdEat 2487.018 kb on + strand, within yfdEat 2487.021 kb on - strand, within yfdEat 2487.021 kb on - strand, within yfdEat 2487.022 kb on - strand, within yfdEat 2487.022 kb on - strand, within yfdEat 2487.026 kb on - strand, within yfdEat 2487.052 kb on - strand, within yfdEat 2487.058 kb on - strand, within yfdEat 2487.117 kb on + strandat 2487.163 kb on - strandat 2487.209 kb on - strandat 2487.209 kb on - strandat 2487.227 kb on - strandat 2487.227 kb on - strandat 2487.297 kb on - strandat 2487.302 kb on - strandat 2487.311 kb on - strandat 2487.329 kb on - strandat 2487.333 kb on + strandat 2487.341 kb on - strandat 2487.347 kb on - strandat 2487.349 kb on + strandat 2487.351 kb on - strandat 2487.352 kb on + strandat 2487.355 kb on - strandat 2487.355 kb on - strandat 2487.357 kb on - strandat 2487.357 kb on - strandat 2487.357 kb on - strandat 2487.357 kb on - strandat 2487.363 kb on - strand, within yfdVat 2487.370 kb on - strand, within yfdVat 2487.370 kb on - strand, within yfdVat 2487.401 kb on - strand, within yfdVat 2487.404 kb on + strand, within yfdVat 2487.417 kb on + strand, within yfdVat 2487.417 kb on - strand, within yfdVat 2487.417 kb on - strand, within yfdVat 2487.422 kb on - strand, within yfdVat 2487.437 kb on - strandat 2487.437 kb on - strand, within yfdVat 2487.437 kb on - strand, within yfdVat 2487.437 kb on - strand, within yfdVat 2487.452 kb on - strand, within yfdVat 2487.460 kb on + strand, within yfdVat 2487.476 kb on + strand, within yfdVat 2487.560 kb on + strand, within yfdVat 2487.570 kb on + strand, within yfdVat 2487.586 kb on + strand, within yfdVat 2487.626 kb on - strand, within yfdVat 2487.626 kb on - strand, within yfdVat 2487.626 kb on - strand, within yfdVat 2487.646 kb on + strand, within yfdVat 2487.661 kb on - strand, within yfdVat 2487.662 kb on - strand, within yfdVat 2487.663 kb on + strand, within yfdVat 2487.678 kb on + strand, within yfdVat 2487.678 kb on + strand, within yfdVat 2487.678 kb on + strand, within yfdVat 2487.678 kb on + strand, within yfdVat 2487.764 kb on + strand, within yfdVat 2487.764 kb on + strand, within yfdV

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Per-strain Table

Position Strand Gene LocusTag Fraction 18 hr NoPredatorControl
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2,485,047 + evgS b2370 0.74 -2.7
2,485,051 + evgS b2370 0.74 -1.1
2,485,054 + evgS b2370 0.74 +3.1
2,485,065 + evgS b2370 0.74 -1.0
2,485,065 + evgS b2370 0.74 -1.8
2,485,086 + evgS b2370 0.75 +1.0
2,485,090 - evgS b2370 0.75 +0.5
2,485,091 + evgS b2370 0.75 -0.5
2,485,102 + evgS b2370 0.75 +1.3
2,485,111 - evgS b2370 0.76 +1.0
2,485,183 - evgS b2370 0.78 -2.0
2,485,183 - evgS b2370 0.78 +1.0
2,485,190 + evgS b2370 0.78 +1.0
2,485,193 - evgS b2370 0.78 -0.6
2,485,243 + evgS b2370 0.79 +0.3
2,485,246 - evgS b2370 0.79 -0.1
2,485,248 + evgS b2370 0.79 +0.6
2,485,317 - evgS b2370 0.81 -0.5
2,485,343 - evgS b2370 0.82 +0.0
2,485,354 - evgS b2370 0.82 +0.5
2,485,360 + evgS b2370 0.82 +0.5
2,485,364 - evgS b2370 0.83 -1.0
2,485,365 - evgS b2370 0.83 -0.7
2,485,369 + evgS b2370 0.83 +0.9
2,485,369 + evgS b2370 0.83 +0.5
2,485,375 - evgS b2370 0.83 +0.0
2,485,375 - evgS b2370 0.83 -1.7
2,485,375 - evgS b2370 0.83 +1.0
2,485,378 + evgS b2370 0.83 -0.4
2,485,389 - evgS b2370 0.83 -1.0
2,485,391 + evgS b2370 0.83 -0.3
2,485,391 + evgS b2370 0.83 +0.1
2,485,393 - evgS b2370 0.83 -0.5
2,485,400 + evgS b2370 0.84 -0.9
2,485,458 - evgS b2370 0.85 +0.4
2,485,459 + evgS b2370 0.85 +0.0
2,485,465 - evgS b2370 0.85 +0.8
2,485,465 - evgS b2370 0.85 +0.1
2,485,492 + evgS b2370 0.86 -1.3
2,485,493 + evgS b2370 0.86 -0.2
2,485,507 + evgS b2370 0.87 +0.3
2,485,507 + evgS b2370 0.87 -0.5
2,485,507 + evgS b2370 0.87 -0.2
2,485,512 + evgS b2370 0.87 -0.7
2,485,516 + evgS b2370 0.87 -1.0
2,485,516 - evgS b2370 0.87 -1.7
2,485,518 + evgS b2370 0.87 -0.3
2,485,518 + evgS b2370 0.87 +1.1
2,485,518 + evgS b2370 0.87 +0.3
2,485,518 + evgS b2370 0.87 +0.6
2,485,518 + evgS b2370 0.87 -0.2
2,485,518 + evgS b2370 0.87 +0.3
2,485,518 + evgS b2370 0.87 +0.2
2,485,518 + evgS b2370 0.87 +0.6
2,485,526 - evgS b2370 0.87 -1.5
2,485,526 - evgS b2370 0.87 -1.0
2,485,538 + evgS b2370 0.87 -0.3
2,485,538 + evgS b2370 0.87 +1.4
2,485,556 + evgS b2370 0.88 +0.8
2,485,564 - evgS b2370 0.88 -1.3
2,485,565 + evgS b2370 0.88 +0.1
2,485,580 + evgS b2370 0.89 -0.8
2,485,580 - evgS b2370 0.89 -0.5
2,485,584 + evgS b2370 0.89 +0.7
2,485,588 - evgS b2370 0.89 +0.0
2,485,588 - evgS b2370 0.89 +1.0
2,485,611 + evgS b2370 0.89 -0.5
2,485,611 + evgS b2370 0.89 +0.9
2,485,629 - evgS b2370 0.90 -1.5
2,485,629 - evgS b2370 0.90 +1.0
2,485,647 - +1.0
2,485,651 - -1.0
2,485,688 + -0.5
2,485,688 + +0.4
2,485,688 + -0.2
2,485,688 + +0.0
2,485,688 + -0.1
2,485,688 + -0.9
2,485,693 + +0.6
2,485,693 + +0.3
2,485,700 + -0.5
2,485,700 + +0.2
2,485,707 - +1.0
2,485,718 + +0.6
2,485,725 - +0.0
2,485,728 - +1.0
2,485,763 + -0.6
2,485,763 - -2.1
2,485,765 + +0.7
2,485,765 + -0.2
2,485,765 + -1.0
2,485,765 + -0.1
2,485,765 + -0.1
2,485,765 + +0.4
2,485,773 - +1.0
2,485,773 - +0.3
2,485,797 + +0.3
2,485,799 + +0.4
2,485,806 - -1.0
2,485,809 + -0.7
2,485,809 + +0.0
2,485,809 + +0.1
2,485,866 + +0.3
2,485,893 + -0.8
2,485,893 + +0.4
2,485,907 - -0.5
2,485,917 + +2.6
2,485,922 + +0.2
2,485,925 + -0.4
2,485,925 + -0.6
2,485,945 + +0.3
2,485,945 + -0.1
2,485,945 + +0.7
2,485,947 + +0.4
2,485,947 + +0.2
2,485,955 + +0.1
2,485,988 + -0.1
2,485,999 + -0.3
2,486,000 + -0.3
2,486,024 + -1.5
2,486,024 + -0.3
2,486,030 - +0.0
2,486,032 - -0.1
2,486,032 - -0.5
2,486,045 - -1.8
2,486,067 - +0.1
2,486,067 - -2.3
2,486,076 - -1.4
2,486,081 + +0.0
2,486,086 - -0.7
2,486,087 - +0.2
2,486,091 - -1.0
2,486,092 + +1.0
2,486,102 + +0.2
2,486,102 + +0.0
2,486,102 + +0.5
2,486,110 - +0.0
2,486,110 - -1.5
2,486,112 - +1.0
2,486,120 - +1.0
2,486,124 - +1.0
2,486,143 + +1.0
2,486,226 - yfdE b2371 0.16 +0.0
2,486,226 - yfdE b2371 0.16 +2.0
2,486,262 + yfdE b2371 0.19 +1.0
2,486,284 - yfdE b2371 0.21 -2.1
2,486,284 - yfdE b2371 0.21 -1.3
2,486,326 - yfdE b2371 0.25 -0.6
2,486,378 - yfdE b2371 0.29 -1.1
2,486,380 - yfdE b2371 0.29 -0.4
2,486,383 - yfdE b2371 0.29 -1.3
2,486,388 - yfdE b2371 0.30 -0.3
2,486,388 - yfdE b2371 0.30 -2.8
2,486,397 - yfdE b2371 0.31 -0.8
2,486,405 - yfdE b2371 0.31 +0.9
2,486,405 - yfdE b2371 0.31 +0.4
2,486,405 - yfdE b2371 0.31 -0.6
2,486,405 - yfdE b2371 0.31 -0.9
2,486,460 - yfdE b2371 0.36 -1.0
2,486,466 - yfdE b2371 0.37 +0.4
2,486,466 - yfdE b2371 0.37 +0.0
2,486,516 - yfdE b2371 0.41 +0.8
2,486,542 - yfdE b2371 0.43 -0.4
2,486,542 - yfdE b2371 0.43 -2.0
2,486,547 - yfdE b2371 0.44 +0.1
2,486,547 - yfdE b2371 0.44 -0.1
2,486,552 - yfdE b2371 0.44 -0.0
2,486,621 + yfdE b2371 0.50 +1.0
2,486,674 - yfdE b2371 0.55 -2.1
2,486,674 - yfdE b2371 0.55 -1.3
2,486,674 - yfdE b2371 0.55 -0.4
2,486,682 - yfdE b2371 0.56 -0.8
2,486,689 - yfdE b2371 0.56 -1.2
2,486,689 - yfdE b2371 0.56 +0.9
2,486,689 - yfdE b2371 0.56 -0.4
2,486,699 - yfdE b2371 0.57 -1.9
2,486,701 - yfdE b2371 0.57 -1.0
2,486,719 - +0.5
2,486,728 + yfdE b2371 0.60 +1.0
2,486,728 + yfdE b2371 0.60 +1.0
2,486,754 + yfdE b2371 0.62 +1.0
2,486,765 + yfdE b2371 0.63 +0.0
2,486,765 + yfdE b2371 0.63 +1.0
2,486,783 - yfdE b2371 0.64 +0.0
2,486,789 + yfdE b2371 0.65 +0.9
2,486,830 + yfdE b2371 0.68 -0.5
2,486,830 + yfdE b2371 0.68 -1.0
2,487,014 - yfdE b2371 0.85 +1.9
2,487,016 + yfdE b2371 0.85 +1.0
2,487,018 + yfdE b2371 0.85 +1.0
2,487,021 - yfdE b2371 0.85 +1.0
2,487,021 - yfdE b2371 0.85 +1.0
2,487,022 - yfdE b2371 0.85 +0.7
2,487,022 - yfdE b2371 0.85 +0.0
2,487,026 - yfdE b2371 0.86 +0.0
2,487,052 - yfdE b2371 0.88 +1.0
2,487,058 - yfdE b2371 0.88 +1.0
2,487,117 + -0.4
2,487,163 - +0.0
2,487,209 - +0.1
2,487,209 - +0.2
2,487,227 - +0.1
2,487,227 - -0.1
2,487,297 - -0.9
2,487,302 - -0.1
2,487,311 - -0.0
2,487,329 - -0.2
2,487,333 + +1.1
2,487,341 - +1.3
2,487,347 - +0.1
2,487,349 + -0.5
2,487,351 - +0.7
2,487,352 + +1.1
2,487,355 - -1.5
2,487,355 - +0.5
2,487,357 - +0.6
2,487,357 - +0.1
2,487,357 - -0.3
2,487,357 - +0.7
2,487,363 - yfdV b2372 0.10 -0.8
2,487,370 - yfdV b2372 0.11 -0.3
2,487,370 - yfdV b2372 0.11 -0.6
2,487,401 - yfdV b2372 0.14 +0.6
2,487,404 + yfdV b2372 0.15 +1.1
2,487,417 + yfdV b2372 0.16 -0.5
2,487,417 - yfdV b2372 0.16 +0.1
2,487,417 - yfdV b2372 0.16 -0.5
2,487,422 - yfdV b2372 0.17 -1.3
2,487,437 - -0.9
2,487,437 - yfdV b2372 0.18 +0.5
2,487,437 - yfdV b2372 0.18 +0.8
2,487,437 - yfdV b2372 0.18 -0.0
2,487,452 - yfdV b2372 0.20 +1.1
2,487,460 + yfdV b2372 0.21 -1.9
2,487,476 + yfdV b2372 0.22 +1.7
2,487,560 + yfdV b2372 0.31 -2.3
2,487,570 + yfdV b2372 0.32 -1.5
2,487,586 + yfdV b2372 0.34 +0.5
2,487,626 - yfdV b2372 0.38 +0.7
2,487,626 - yfdV b2372 0.38 -1.4
2,487,626 - yfdV b2372 0.38 +0.5
2,487,646 + yfdV b2372 0.40 +0.3
2,487,661 - yfdV b2372 0.42 +2.5
2,487,662 - yfdV b2372 0.42 -0.9
2,487,663 + yfdV b2372 0.42 +1.1
2,487,678 + yfdV b2372 0.44 -0.5
2,487,678 + yfdV b2372 0.44 +0.1
2,487,678 + yfdV b2372 0.44 +0.1
2,487,678 + yfdV b2372 0.44 +2.1
2,487,764 + yfdV b2372 0.53 +3.1
2,487,764 + yfdV b2372 0.53 -0.5

Or see this region's nucleotide sequence