Experiment: 18 hr NoPredatorControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt modC and ybhA are separated by 0 nucleotides ybhA and ybhE are separated by 154 nucleotides
b0765: modC - molybdate transporter subunit (NCBI), at 795,777 to 796,835
modC
b0766: ybhA - predicted hydrolase (NCBI), at 796,836 to 797,654
ybhA
b0767: ybhE - 6-phosphogluconolactonase (NCBI), at 797,809 to 798,804
ybhE
Position (kb) 796
797
798 Strain fitness (log2 ratio) -2
-1
0
1 at 796.082 kb on + strand, within modC at 796.082 kb on + strand, within modC at 796.218 kb on + strand, within modC at 796.234 kb on + strand, within modC at 796.234 kb on + strand, within modC at 796.352 kb on + strand, within modC at 796.369 kb on + strand, within modC at 796.369 kb on + strand, within modC at 796.377 kb on + strand, within modC at 796.377 kb on + strand, within modC at 796.377 kb on + strand, within modC at 796.377 kb on - strand, within modC at 796.377 kb on - strand, within modC at 796.590 kb on - strand, within modC at 796.862 kb on + strand at 797.012 kb on - strand, within ybhA at 797.022 kb on - strand, within ybhA at 797.100 kb on - strand, within ybhA at 797.122 kb on - strand, within ybhA at 797.289 kb on + strand, within ybhA at 797.318 kb on - strand, within ybhA at 797.334 kb on + strand, within ybhA at 797.334 kb on + strand at 797.380 kb on - strand, within ybhA at 797.565 kb on + strand, within ybhA at 797.565 kb on + strand, within ybhA at 797.592 kb on - strand at 797.615 kb on - strand at 797.615 kb on - strand at 797.702 kb on + strand at 797.702 kb on + strand at 797.775 kb on + strand at 797.960 kb on + strand, within ybhE at 798.019 kb on + strand, within ybhE at 798.080 kb on + strand, within ybhE at 798.105 kb on - strand, within ybhE at 798.134 kb on - strand at 798.207 kb on + strand, within ybhE at 798.207 kb on + strand, within ybhE at 798.414 kb on - strand, within ybhE at 798.414 kb on - strand, within ybhE at 798.502 kb on + strand, within ybhE at 798.510 kb on - strand, within ybhE at 798.533 kb on + strand, within ybhE at 798.533 kb on + strand, within ybhE at 798.533 kb on + strand, within ybhE
Per-strain Table
Position Strand Gene LocusTag Fraction 18 hr NoPredatorControl remove 796,082 + modC b0765 0.29 -0.3 796,082 + modC b0765 0.29 -0.1 796,218 + modC b0765 0.42 +0.3 796,234 + modC b0765 0.43 +0.0 796,234 + modC b0765 0.43 +1.0 796,352 + modC b0765 0.54 -0.1 796,369 + modC b0765 0.56 -0.7 796,369 + modC b0765 0.56 -0.1 796,377 + modC b0765 0.57 +0.1 796,377 + modC b0765 0.57 +0.3 796,377 + modC b0765 0.57 -0.3 796,377 - modC b0765 0.57 -1.9 796,377 - modC b0765 0.57 -0.3 796,590 - modC b0765 0.77 -0.6 796,862 + -0.0 797,012 - ybhA b0766 0.21 +0.4 797,022 - ybhA b0766 0.23 +0.4 797,100 - ybhA b0766 0.32 +0.6 797,122 - ybhA b0766 0.35 +1.3 797,289 + ybhA b0766 0.55 +0.3 797,318 - ybhA b0766 0.59 +0.0 797,334 + ybhA b0766 0.61 +0.2 797,334 + -0.3 797,380 - ybhA b0766 0.66 +0.4 797,565 + ybhA b0766 0.89 +0.1 797,565 + ybhA b0766 0.89 +0.2 797,592 - +0.1 797,615 - -1.4 797,615 - -0.2 797,702 + +0.5 797,702 + +0.1 797,775 + +0.2 797,960 + ybhE b0767 0.15 -0.7 798,019 + ybhE b0767 0.21 -1.5 798,080 + ybhE b0767 0.27 +0.1 798,105 - ybhE b0767 0.30 -0.4 798,134 - -0.5 798,207 + ybhE b0767 0.40 -0.6 798,207 + ybhE b0767 0.40 +0.2 798,414 - ybhE b0767 0.61 -0.6 798,414 - ybhE b0767 0.61 +0.6 798,502 + ybhE b0767 0.70 +0.5 798,510 - ybhE b0767 0.70 +0.7 798,533 + ybhE b0767 0.73 +0.4 798,533 + ybhE b0767 0.73 +0.9 798,533 + ybhE b0767 0.73 -1.8
Or see this region's nucleotide sequence