Strain Fitness in Escherichia coli BW25113 around b2149

Experiment: 3 hr NoPredatorControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmglC and mglA are separated by 15 nucleotidesmglA and mglB are separated by 60 nucleotides b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775 mglC b2149: mglA - fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 2,235,791 to 2,237,311 mglA b2150: mglB - methyl-galactoside transporter subunit (NCBI), at 2,237,372 to 2,238,370 mglB Position (kb) 2235 2236 2237 2238Strain fitness (log2 ratio) -2 -1 0 1 2at 2234.823 kb on + strandat 2234.843 kb on + strandat 2234.859 kb on + strandat 2234.923 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.944 kb on + strand, within mglCat 2234.956 kb on - strand, within mglCat 2234.963 kb on - strand, within mglCat 2234.963 kb on - strand, within mglCat 2234.988 kb on - strand, within mglCat 2235.007 kb on + strand, within mglCat 2235.021 kb on - strand, within mglCat 2235.075 kb on + strand, within mglCat 2235.103 kb on - strand, within mglCat 2235.103 kb on - strand, within mglCat 2235.107 kb on + strand, within mglCat 2235.107 kb on + strand, within mglCat 2235.113 kb on - strand, within mglCat 2235.113 kb on - strand, within mglCat 2235.209 kb on + strand, within mglCat 2235.259 kb on + strand, within mglCat 2235.366 kb on + strand, within mglCat 2235.366 kb on + strand, within mglCat 2235.473 kb on + strand, within mglCat 2235.473 kb on + strand, within mglCat 2235.522 kb on + strand, within mglCat 2235.523 kb on - strand, within mglCat 2235.557 kb on - strand, within mglCat 2235.564 kb on + strand, within mglCat 2235.580 kb on + strand, within mglCat 2235.640 kb on + strand, within mglCat 2235.640 kb on + strand, within mglCat 2235.795 kb on - strandat 2235.805 kb on - strandat 2235.805 kb on - strandat 2235.902 kb on - strandat 2235.934 kb on - strandat 2235.998 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.005 kb on - strand, within mglAat 2236.007 kb on - strand, within mglAat 2236.010 kb on - strand, within mglAat 2236.067 kb on - strand, within mglAat 2236.067 kb on - strand, within mglAat 2236.147 kb on + strand, within mglAat 2236.173 kb on + strand, within mglAat 2236.249 kb on - strand, within mglAat 2236.249 kb on - strand, within mglAat 2236.284 kb on - strand, within mglAat 2236.331 kb on + strand, within mglAat 2236.331 kb on + strand, within mglAat 2236.331 kb on - strand, within mglAat 2236.356 kb on - strand, within mglAat 2236.364 kb on - strand, within mglAat 2236.387 kb on - strand, within mglAat 2236.421 kb on - strand, within mglAat 2236.446 kb on + strand, within mglAat 2236.466 kb on - strand, within mglAat 2236.478 kb on - strand, within mglAat 2236.510 kb on - strand, within mglAat 2236.510 kb on - strand, within mglAat 2236.559 kb on + strand, within mglAat 2236.579 kb on - strand, within mglAat 2236.579 kb on - strand, within mglAat 2236.626 kb on - strand, within mglAat 2236.697 kb on + strand, within mglAat 2236.697 kb on + strand, within mglAat 2236.774 kb on + strand, within mglAat 2236.895 kb on + strand, within mglAat 2236.901 kb on - strand, within mglAat 2236.943 kb on - strand, within mglAat 2236.947 kb on + strand, within mglAat 2236.959 kb on + strand, within mglAat 2236.962 kb on - strand, within mglAat 2236.962 kb on - strand, within mglAat 2236.988 kb on + strand, within mglAat 2236.988 kb on - strand, within mglAat 2237.034 kb on + strand, within mglAat 2237.079 kb on - strand, within mglAat 2237.084 kb on + strand, within mglAat 2237.193 kb on + strandat 2237.238 kb on - strandat 2237.249 kb on - strandat 2237.267 kb on - strandat 2237.291 kb on - strandat 2237.296 kb on - strandat 2237.296 kb on - strandat 2237.336 kb on - strandat 2237.356 kb on - strandat 2237.356 kb on - strandat 2237.356 kb on - strandat 2237.356 kb on - strandat 2237.407 kb on - strandat 2237.407 kb on - strandat 2237.422 kb on - strandat 2237.422 kb on - strandat 2237.430 kb on - strandat 2237.530 kb on - strand, within mglBat 2237.897 kb on - strand, within mglBat 2237.901 kb on + strand, within mglBat 2237.927 kb on - strand, within mglBat 2237.989 kb on - strand, within mglBat 2238.223 kb on - strand, within mglBat 2238.269 kb on + strand, within mglBat 2238.309 kb on + strandat 2238.309 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 3 hr NoPredatorControl
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2,234,823 + -0.8
2,234,843 + +0.2
2,234,859 + -1.2
2,234,923 + mglC b2148 0.16 -1.4
2,234,944 + mglC b2148 0.18 +0.1
2,234,944 + mglC b2148 0.18 -1.2
2,234,944 + mglC b2148 0.18 -0.2
2,234,944 + mglC b2148 0.18 -1.7
2,234,956 - mglC b2148 0.19 -0.1
2,234,963 - mglC b2148 0.20 +0.1
2,234,963 - mglC b2148 0.20 -0.2
2,234,988 - mglC b2148 0.22 -0.1
2,235,007 + mglC b2148 0.24 -0.5
2,235,021 - mglC b2148 0.25 +0.5
2,235,075 + mglC b2148 0.31 +0.2
2,235,103 - mglC b2148 0.33 +0.9
2,235,103 - mglC b2148 0.33 -0.6
2,235,107 + mglC b2148 0.34 -0.2
2,235,107 + mglC b2148 0.34 -0.7
2,235,113 - mglC b2148 0.34 -0.7
2,235,113 - mglC b2148 0.34 +0.3
2,235,209 + mglC b2148 0.44 -0.8
2,235,259 + mglC b2148 0.49 -0.3
2,235,366 + mglC b2148 0.59 -0.2
2,235,366 + mglC b2148 0.59 +0.2
2,235,473 + mglC b2148 0.70 +0.4
2,235,473 + mglC b2148 0.70 -0.2
2,235,522 + mglC b2148 0.75 -0.7
2,235,523 - mglC b2148 0.75 -0.0
2,235,557 - mglC b2148 0.78 +1.6
2,235,564 + mglC b2148 0.79 -1.6
2,235,580 + mglC b2148 0.81 +0.8
2,235,640 + mglC b2148 0.87 -0.1
2,235,640 + mglC b2148 0.87 -0.2
2,235,795 - -0.6
2,235,805 - -0.0
2,235,805 - +0.8
2,235,902 - +0.1
2,235,934 - +0.1
2,235,998 - mglA b2149 0.14 -2.6
2,236,005 - mglA b2149 0.14 -0.3
2,236,005 - mglA b2149 0.14 -0.0
2,236,005 - mglA b2149 0.14 -1.9
2,236,005 - mglA b2149 0.14 -1.6
2,236,005 - mglA b2149 0.14 -1.1
2,236,005 - mglA b2149 0.14 -1.4
2,236,007 - mglA b2149 0.14 -0.8
2,236,010 - mglA b2149 0.14 -0.0
2,236,067 - mglA b2149 0.18 +1.2
2,236,067 - mglA b2149 0.18 -1.1
2,236,147 + mglA b2149 0.23 -0.8
2,236,173 + mglA b2149 0.25 -1.0
2,236,249 - mglA b2149 0.30 -1.6
2,236,249 - mglA b2149 0.30 +0.6
2,236,284 - mglA b2149 0.32 -0.6
2,236,331 + mglA b2149 0.36 +1.6
2,236,331 + mglA b2149 0.36 +1.6
2,236,331 - mglA b2149 0.36 -1.2
2,236,356 - mglA b2149 0.37 -2.4
2,236,364 - mglA b2149 0.38 -1.9
2,236,387 - mglA b2149 0.39 -0.1
2,236,421 - mglA b2149 0.41 -1.4
2,236,446 + mglA b2149 0.43 +1.6
2,236,466 - mglA b2149 0.44 -0.5
2,236,478 - mglA b2149 0.45 +0.4
2,236,510 - mglA b2149 0.47 -2.4
2,236,510 - mglA b2149 0.47 -0.3
2,236,559 + mglA b2149 0.50 +0.3
2,236,579 - mglA b2149 0.52 -1.3
2,236,579 - mglA b2149 0.52 +1.7
2,236,626 - mglA b2149 0.55 -1.5
2,236,697 + mglA b2149 0.60 +1.6
2,236,697 + mglA b2149 0.60 -0.2
2,236,774 + mglA b2149 0.65 +0.6
2,236,895 + mglA b2149 0.73 +0.6
2,236,901 - mglA b2149 0.73 +0.6
2,236,943 - mglA b2149 0.76 -2.1
2,236,947 + mglA b2149 0.76 +0.6
2,236,959 + mglA b2149 0.77 -0.0
2,236,962 - mglA b2149 0.77 -0.1
2,236,962 - mglA b2149 0.77 -1.7
2,236,988 + mglA b2149 0.79 -0.4
2,236,988 - mglA b2149 0.79 -0.8
2,237,034 + mglA b2149 0.82 +0.2
2,237,079 - mglA b2149 0.85 +0.2
2,237,084 + mglA b2149 0.85 -2.0
2,237,193 + +1.6
2,237,238 - -0.6
2,237,249 - -0.1
2,237,267 - +0.4
2,237,291 - +0.0
2,237,296 - -0.8
2,237,296 - -0.8
2,237,336 - +2.1
2,237,356 - +0.2
2,237,356 - +0.1
2,237,356 - +0.3
2,237,356 - +0.0
2,237,407 - +0.3
2,237,407 - -1.1
2,237,422 - -0.6
2,237,422 - -0.3
2,237,430 - +1.3
2,237,530 - mglB b2150 0.16 +0.2
2,237,897 - mglB b2150 0.53 +0.7
2,237,901 + mglB b2150 0.53 -0.3
2,237,927 - mglB b2150 0.56 -0.1
2,237,989 - mglB b2150 0.62 +0.4
2,238,223 - mglB b2150 0.85 +0.2
2,238,269 + mglB b2150 0.90 -0.3
2,238,309 + +0.7
2,238,309 + +1.0

Or see this region's nucleotide sequence