Strain Fitness in Escherichia coli BW25113 around b3585

Experiment: 3 hr rep1_Tiberius_no_dilution

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3 hr rep1_Tiberius_no_dilution
3,749,047	+	ysaD	b4649	0.55	-1.1
3,749,071	+	ysaD	b4649	0.68	-0.0
3,749,081	+	ysaD	b4649	0.73	-0.6
3,749,086	+	ysaD	b4649	0.76	-0.3
3,749,166	-				-0.5
3,749,166	-				+0.4
3,749,188	+				+1.1
3,749,238	+	yiaT	b3584	0.12	+1.4
3,749,243	+	yiaT	b3584	0.12	+0.2
3,749,317	-	yiaT	b3584	0.22	-0.1
3,749,317	-	yiaT	b3584	0.22	+0.6
3,749,332	+	yiaT	b3584	0.24	-0.2
3,749,332	+	yiaT	b3584	0.24	+1.8
3,749,345	-	yiaT	b3584	0.26	-1.1
3,749,350	+	yiaT	b3584	0.27	+0.4
3,749,352	-	yiaT	b3584	0.27	+0.0
3,749,352	-	yiaT	b3584	0.27	-0.5
3,749,352	-	yiaT	b3584	0.27	-0.6
3,749,469	-	yiaT	b3584	0.43	+0.1
3,749,472	+	yiaT	b3584	0.43	+1.3
3,749,472	+	yiaT	b3584	0.43	-1.0
3,749,505	+	yiaT	b3584	0.48	+0.9
3,749,505	+	yiaT	b3584	0.48	+1.1
3,749,523	+	yiaT	b3584	0.50	+0.9
3,749,523	+	yiaT	b3584	0.50	-0.1
3,749,545	+	yiaT	b3584	0.53	-0.0
3,749,553	-	yiaT	b3584	0.54	+0.7
3,749,562	+	yiaT	b3584	0.55	-1.2
3,749,562	+	yiaT	b3584	0.55	-0.5
3,749,573	+	yiaT	b3584	0.57	+0.4
3,749,575	+	yiaT	b3584	0.57	+0.2
3,749,603	+	yiaT	b3584	0.61	-0.2
3,749,616	+	yiaT	b3584	0.63	+0.9
3,749,642	+	yiaT	b3584	0.66	+0.4
3,749,642	+	yiaT	b3584	0.66	-0.1
3,749,643	+	yiaT	b3584	0.66	-1.1
3,749,643	+				-0.1
3,749,648	+	yiaT	b3584	0.67	-0.8
3,749,654	+	yiaT	b3584	0.68	-0.8
3,749,657	-	yiaT	b3584	0.68	-0.1
3,749,657	-	yiaT	b3584	0.68	+0.6
3,749,659	+	yiaT	b3584	0.69	+0.5
3,749,690	+	yiaT	b3584	0.73	-1.0
3,749,697	+	yiaT	b3584	0.74	+0.4
3,749,701	+	yiaT	b3584	0.74	-0.2
3,749,714	-	yiaT	b3584	0.76	-0.4
3,749,717	+	yiaT	b3584	0.76	+0.7
3,749,723	-	yiaT	b3584	0.77	-0.9
3,749,725	+	yiaT	b3584	0.77	-0.1
3,749,731	+	yiaT	b3584	0.78	-0.7
3,749,732	+	yiaT	b3584	0.78	-0.2
3,749,758	+	yiaT	b3584	0.82	+0.4
3,749,788	+	yiaT	b3584	0.86	-1.0
3,749,788	+	yiaT	b3584	0.86	-0.8
3,749,789	+	yiaT	b3584	0.86	+0.6
3,749,789	+	yiaT	b3584	0.86	+0.2
3,749,804	+	yiaT	b3584	0.88	-1.2
3,749,804	+	yiaT	b3584	0.88	-0.3
3,749,804	+	yiaT	b3584	0.88	-1.1
3,749,942	-				+1.9
3,750,088	-				-0.2
3,750,104	-				+0.7
3,750,104	-				+1.9
3,750,107	-				-0.1
3,750,107	-				-3.2
3,750,114	-	yiaU	b3585	0.10	+1.7
3,750,114	-	yiaU	b3585	0.10	-0.8
3,750,114	-	yiaU	b3585	0.10	-1.6
3,750,114	-	yiaU	b3585	0.10	-0.2
3,750,124	-	yiaU	b3585	0.11	+0.4
3,750,192	-	yiaU	b3585	0.18	-1.9
3,750,197	+	yiaU	b3585	0.19	+0.9
3,750,204	-	yiaU	b3585	0.19	-0.3
3,750,204	-	yiaU	b3585	0.19	-0.6
3,750,206	+	yiaU	b3585	0.20	-0.1
3,750,206	+	yiaU	b3585	0.20	+1.9
3,750,206	+	yiaU	b3585	0.20	+0.4
3,750,214	-	yiaU	b3585	0.20	-0.5
3,750,214	-	yiaU	b3585	0.20	-2.0
3,750,214	-	yiaU	b3585	0.20	+0.0
3,750,219	+	yiaU	b3585	0.21	-0.1
3,750,222	+	yiaU	b3585	0.21	+1.9
3,750,227	+	yiaU	b3585	0.22	+1.9
3,750,227	-	yiaU	b3585	0.22	-1.3
3,750,227	-	yiaU	b3585	0.22	-0.6
3,750,227	-	yiaU	b3585	0.22	-1.4
3,750,227	-	yiaU	b3585	0.22	+0.3
3,750,227	-	yiaU	b3585	0.22	+0.1
3,750,230	+	yiaU	b3585	0.22	-0.5
3,750,230	-	yiaU	b3585	0.22	+1.9
3,750,230	-	yiaU	b3585	0.22	+0.9
3,750,232	-	yiaU	b3585	0.22	+0.1
3,750,248	-	yiaU	b3585	0.24	-0.1
3,750,298	+	yiaU	b3585	0.29	+1.9
3,750,299	-	yiaU	b3585	0.29	-1.0
3,750,305	+	yiaU	b3585	0.30	+2.4
3,750,313	-	yiaU	b3585	0.31	+0.9
3,750,313	-	yiaU	b3585	0.31	-1.1
3,750,313	-	yiaU	b3585	0.31	-0.9
3,750,318	-	yiaU	b3585	0.31	-0.1
3,750,320	-	yiaU	b3585	0.31	+1.9
3,750,320	-	yiaU	b3585	0.31	+0.4
3,750,334	-	yiaU	b3585	0.33	-1.5
3,750,358	-	yiaU	b3585	0.35	-2.6
3,750,358	-	yiaU	b3585	0.35	-0.3
3,750,381	+	yiaU	b3585	0.38	+1.9
3,750,396	-	yiaU	b3585	0.39	-0.2
3,750,462	+	yiaU	b3585	0.46	+1.9
3,750,470	-	yiaU	b3585	0.47	+0.2
3,750,471	+	yiaU	b3585	0.47	+0.9
3,750,478	-	yiaU	b3585	0.47	-0.5
3,750,478	-	yiaU	b3585	0.47	+0.7
3,750,528	-	yiaU	b3585	0.53	+0.2
3,750,529	-	yiaU	b3585	0.53	-0.5
3,750,529	-	yiaU	b3585	0.53	-0.6
3,750,543	+	yiaU	b3585	0.54	-1.1
3,750,546	-	yiaU	b3585	0.54	+0.3
3,750,546	-	yiaU	b3585	0.54	+0.5
3,750,546	-	yiaU	b3585	0.54	+0.2
3,750,548	+	yiaU	b3585	0.55	-1.2
3,750,548	+	yiaU	b3585	0.55	-2.1
3,750,548	+	yiaU	b3585	0.55	-0.1
3,750,550	+	yiaU	b3585	0.55	+0.2
3,750,553	+	yiaU	b3585	0.55	-1.5
3,750,553	+	yiaU	b3585	0.55	-0.5
3,750,556	-	yiaU	b3585	0.55	-0.3
3,750,556	-	yiaU	b3585	0.55	+0.2
3,750,556	-	yiaU	b3585	0.55	+0.1
3,750,561	-	yiaU	b3585	0.56	+1.2
3,750,561	-	yiaU	b3585	0.56	+0.3
3,750,561	-	yiaU	b3585	0.56	-1.1
3,750,561	-	yiaU	b3585	0.56	-0.8
3,750,563	-	yiaU	b3585	0.56	-1.6
3,750,572	-	yiaU	b3585	0.57	-0.2
3,750,572	-				-0.6
3,750,576	-	yiaU	b3585	0.58	+0.4
3,750,577	+	yiaU	b3585	0.58	-0.5
3,750,577	+	yiaU	b3585	0.58	+1.1
3,750,577	+	yiaU	b3585	0.58	-0.4
3,750,585	-	yiaU	b3585	0.58	-0.2
3,750,586	+	yiaU	b3585	0.59	-0.8
3,750,586	+	yiaU	b3585	0.59	+0.0
3,750,588	+	yiaU	b3585	0.59	+1.0
3,750,588	+	yiaU	b3585	0.59	+1.0
3,750,591	+	yiaU	b3585	0.59	+0.1
3,750,594	-	yiaU	b3585	0.59	-0.2
3,750,594	-	yiaU	b3585	0.59	-0.1
3,750,594	-	yiaU	b3585	0.59	+0.3
3,750,604	-	yiaU	b3585	0.60	+0.7
3,750,604	-	yiaU	b3585	0.60	-0.8
3,750,609	+	yiaU	b3585	0.61	-0.7
3,750,613	-	yiaU	b3585	0.61	+0.1
3,750,616	+	yiaU	b3585	0.62	-0.2
3,750,621	+	yiaU	b3585	0.62	-1.4
3,750,621	+	yiaU	b3585	0.62	-2.0
3,750,635	+	yiaU	b3585	0.64	-0.1
3,750,650	-	yiaU	b3585	0.65	-0.1
3,750,665	+	yiaU	b3585	0.67	-1.2
3,750,665	+	yiaU	b3585	0.67	-0.1
3,750,665	+	yiaU	b3585	0.67	-1.8
3,750,672	-	yiaU	b3585	0.67	-0.2
3,750,672	-	yiaU	b3585	0.67	-0.4
3,750,673	-	yiaU	b3585	0.67	-0.6
3,750,673	-	yiaU	b3585	0.67	+0.0
3,750,673	-	yiaU	b3585	0.67	-0.8
3,750,675	+	yiaU	b3585	0.68	-1.2
3,750,675	+	yiaU	b3585	0.68	-0.4
3,750,683	-	yiaU	b3585	0.69	-1.3
3,750,683	-	yiaU	b3585	0.69	-0.0
3,750,683	-	yiaU	b3585	0.69	+0.8
3,750,737	+	yiaU	b3585	0.74	-0.3
3,750,775	+	yiaU	b3585	0.78	+0.6
3,750,778	-	yiaU	b3585	0.78	+2.2
3,750,785	-	yiaU	b3585	0.79	+0.3
3,750,794	+	yiaU	b3585	0.80	+0.2
3,750,827	+	yiaU	b3585	0.83	-1.4
3,750,827	+	yiaU	b3585	0.83	+0.1
3,750,828	+	yiaU	b3585	0.83	-0.1
3,750,836	-	yiaU	b3585	0.84	+0.1
3,750,836	-	yiaU	b3585	0.84	-1.1
3,750,863	-	yiaU	b3585	0.87	-0.9
3,750,863	-	yiaU	b3585	0.87	+0.9
3,750,890	+	yiaU	b3585	0.90	-0.1
3,750,915	-				+0.1
3,750,934	+				-0.7
3,750,954	-				-0.0
3,751,045	+				+0.6
3,751,088	-				-1.4
3,751,147	+	yiaV	b3586	0.14	+0.4
3,751,202	+	yiaV	b3586	0.19	-0.5
3,751,202	+	yiaV	b3586	0.19	-0.3
3,751,256	-	yiaV	b3586	0.24	-0.8
3,751,362	+	yiaV	b3586	0.33	+0.1
3,751,385	-	yiaV	b3586	0.35	+0.1
3,751,401	+	yiaV	b3586	0.36	-0.4
3,751,418	+	yiaV	b3586	0.38	-0.4
3,751,418	+	yiaV	b3586	0.38	+1.0
3,751,423	+	yiaV	b3586	0.38	+0.6
3,751,440	+	yiaV	b3586	0.40	+1.3
3,751,440	+	yiaV	b3586	0.40	+0.4
3,751,467	-	yiaV	b3586	0.42	+0.3
3,751,534	+	yiaV	b3586	0.48	+0.2
3,751,534	+	yiaV	b3586	0.48	-0.4
3,751,534	+	yiaV	b3586	0.48	-0.4
3,751,535	+	yiaV	b3586	0.48	+0.5
3,751,542	-	yiaV	b3586	0.49	-0.1
3,751,542	-	yiaV	b3586	0.49	+0.3
3,751,586	+	yiaV	b3586	0.53	+0.0
3,751,586	+	yiaV	b3586	0.53	-0.3
3,751,683	+	yiaV	b3586	0.61	-0.1
3,751,683	+	yiaV	b3586	0.61	+0.1
3,751,683	-	yiaV	b3586	0.61	-0.3
3,751,683	-	yiaV	b3586	0.61	-0.6
3,751,691	-	yiaV	b3586	0.62	-0.7
3,751,691	-	yiaV	b3586	0.62	+0.9
3,751,699	-	yiaV	b3586	0.63	-0.1
3,751,699	-	yiaV	b3586	0.63	+0.4
3,751,739	-	yiaV	b3586	0.66	+1.1
3,751,747	+	yiaV	b3586	0.67	+0.9
3,751,751	-	yiaV	b3586	0.67	-1.3
3,751,756	-	yiaV	b3586	0.68	-0.4
3,751,756	-	yiaV	b3586	0.68	+0.6
3,751,756	-	yiaV	b3586	0.68	-0.6
3,751,772	+	yiaV	b3586	0.69	+0.6
3,751,772	+	yiaV	b3586	0.69	+0.1
3,751,780	-	yiaV	b3586	0.70	+1.0
3,751,783	+	yiaV	b3586	0.70	+0.9
3,751,790	+	yiaV	b3586	0.71	+0.1
3,751,805	+	yiaV	b3586	0.72	-2.1
3,751,822	+	yiaV	b3586	0.74	+0.4
3,751,822	+	yiaV	b3586	0.74	-0.4
3,751,842	+	yiaV	b3586	0.75	+0.3
3,751,842	+	yiaV	b3586	0.75	+0.2
3,751,843	+	yiaV	b3586	0.75	-0.4
3,751,851	-	yiaV	b3586	0.76	+0.0
3,751,863	+	yiaV	b3586	0.77	+0.9
3,751,863	+	yiaV	b3586	0.77	-0.1
3,751,871	-	yiaV	b3586	0.78	+0.0
3,751,896	+	yiaV	b3586	0.80	-0.3
3,751,896	+	yiaV	b3586	0.80	-0.9
3,751,898	+	yiaV	b3586	0.80	-0.2
3,751,900	+	yiaV	b3586	0.80	-0.4
3,751,904	-	yiaV	b3586	0.81	+0.3
3,751,908	-	yiaV	b3586	0.81	-1.1
3,751,908	-	yiaV	b3586	0.81	-0.2
3,751,910	+	yiaV	b3586	0.81	-0.4
3,751,910	+	yiaV	b3586	0.81	+0.2
3,751,910	+	yiaV	b3586	0.81	+0.6
3,751,910	+	yiaV	b3586	0.81	+0.3
3,751,914	-	yiaV	b3586	0.82	-0.9
3,751,915	+	yiaV	b3586	0.82	-0.3
3,751,918	-	yiaV	b3586	0.82	-2.0
3,751,918	-	yiaV	b3586	0.82	-0.5
3,751,919	-	yiaV	b3586	0.82	-1.6
3,751,919	-	yiaV	b3586	0.82	-1.2
3,751,919	-	yiaV	b3586	0.82	-0.1
3,751,921	+	yiaV	b3586	0.82	-0.4
3,751,924	-	yiaV	b3586	0.82	+1.4
3,751,924	-	yiaV	b3586	0.82	-0.6
3,751,961	+	yiaV	b3586	0.86	+0.4
3,751,961	+	yiaV	b3586	0.86	+0.0
3,751,961	+	yiaV	b3586	0.86	-0.6
3,751,962	+	yiaV	b3586	0.86	+0.1
3,751,969	+	yiaV	b3586	0.86	+0.4
3,751,969	+	yiaV	b3586	0.86	+0.5
3,751,974	-	yiaV	b3586	0.87	-0.4