Experiment: NaCl stress 25mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4906 and PP_4907 are separated by 44 nucleotides PP_4907 and PP_4908 are separated by 9 nucleotides PP_4908 and PP_4909 are separated by 75 nucleotides
PP_4906: PP_4906 - conserved protein of unknown function, at 5,576,279 to 5,577,814
_4906
PP_4907: PP_4907 - Thiosulfate sulfurtransferase, at 5,577,859 to 5,578,668
_4907
PP_4908: PP_4908 - phosphatidylserine decarboxylase, at 5,578,678 to 5,579,541
_4908
PP_4909: PP_4909 - phosphoserine phosphatase, at 5,579,617 to 5,580,864
_4909
Position (kb) 5577
5578
5579 Strain fitness (log2 ratio) -1
0
1 at 5576.883 kb on - strand, within PP_4906 at 5576.883 kb on - strand, within PP_4906 at 5577.054 kb on + strand, within PP_4906 at 5577.054 kb on + strand, within PP_4906 at 5577.054 kb on + strand, within PP_4906 at 5577.126 kb on + strand, within PP_4906 at 5577.126 kb on + strand, within PP_4906 at 5577.126 kb on + strand, within PP_4906 at 5577.126 kb on + strand, within PP_4906 at 5577.127 kb on - strand, within PP_4906 at 5577.166 kb on - strand, within PP_4906 at 5577.468 kb on - strand, within PP_4906 at 5577.528 kb on + strand, within PP_4906 at 5577.529 kb on - strand, within PP_4906 at 5577.657 kb on + strand, within PP_4906 at 5577.657 kb on + strand, within PP_4906 at 5577.658 kb on - strand, within PP_4906 at 5577.658 kb on - strand, within PP_4906 at 5577.660 kb on + strand, within PP_4906 at 5577.660 kb on + strand, within PP_4906 at 5577.660 kb on + strand, within PP_4906 at 5577.660 kb on + strand, within PP_4906 at 5577.661 kb on - strand at 5577.661 kb on - strand at 5577.661 kb on - strand at 5577.661 kb on - strand at 5577.796 kb on + strand at 5577.797 kb on - strand at 5577.824 kb on + strand at 5578.108 kb on + strand, within PP_4907 at 5578.108 kb on + strand, within PP_4907 at 5578.108 kb on + strand, within PP_4907 at 5578.108 kb on + strand, within PP_4907 at 5578.117 kb on + strand, within PP_4907 at 5578.186 kb on + strand, within PP_4907 at 5578.186 kb on + strand, within PP_4907 at 5578.186 kb on + strand, within PP_4907 at 5578.192 kb on + strand, within PP_4907 at 5578.192 kb on + strand, within PP_4907 at 5578.280 kb on + strand, within PP_4907 at 5578.570 kb on + strand, within PP_4907 at 5578.570 kb on + strand, within PP_4907 at 5578.612 kb on + strand at 5579.569 kb on - strand at 5579.569 kb on - strand at 5579.569 kb on - strand at 5579.654 kb on + strand at 5579.655 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NaCl stress 25mM remove 5,576,883 - PP_4906 0.39 -0.3 5,576,883 - PP_4906 0.39 -0.1 5,577,054 + PP_4906 0.50 +0.5 5,577,054 + PP_4906 0.50 +0.3 5,577,054 + PP_4906 0.50 -0.0 5,577,126 + PP_4906 0.55 -0.8 5,577,126 + PP_4906 0.55 +0.1 5,577,126 + PP_4906 0.55 +0.4 5,577,126 + PP_4906 0.55 +0.2 5,577,127 - PP_4906 0.55 -0.1 5,577,166 - PP_4906 0.58 -0.3 5,577,468 - PP_4906 0.77 -0.1 5,577,528 + PP_4906 0.81 -1.0 5,577,529 - PP_4906 0.81 +0.6 5,577,657 + PP_4906 0.90 -0.4 5,577,657 + PP_4906 0.90 +0.2 5,577,658 - PP_4906 0.90 +0.3 5,577,658 - PP_4906 0.90 +0.1 5,577,660 + PP_4906 0.90 -0.9 5,577,660 + PP_4906 0.90 -0.2 5,577,660 + PP_4906 0.90 +0.8 5,577,660 + PP_4906 0.90 -0.1 5,577,661 - -0.0 5,577,661 - +1.3 5,577,661 - +0.3 5,577,661 - +0.4 5,577,796 + -0.7 5,577,797 - -0.6 5,577,824 + +0.2 5,578,108 + PP_4907 0.31 +0.5 5,578,108 + PP_4907 0.31 -1.3 5,578,108 + PP_4907 0.31 -0.0 5,578,108 + PP_4907 0.31 -0.4 5,578,117 + PP_4907 0.32 -0.1 5,578,186 + PP_4907 0.40 +0.0 5,578,186 + PP_4907 0.40 -0.1 5,578,186 + PP_4907 0.40 +0.4 5,578,192 + PP_4907 0.41 -1.1 5,578,192 + PP_4907 0.41 +0.0 5,578,280 + PP_4907 0.52 -0.1 5,578,570 + PP_4907 0.88 -0.5 5,578,570 + PP_4907 0.88 -0.6 5,578,612 + +1.1 5,579,569 - -0.2 5,579,569 - +1.0 5,579,569 - -0.2 5,579,654 + -0.6 5,579,655 - -0.9
Or see this region's nucleotide sequence