Experiment: LB_noSalt 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4830 and PP_4831 overlap by 8 nucleotides PP_4831 and PP_4832 overlap by 4 nucleotides PP_4832 and PP_4833 are separated by 134 nucleotides
PP_4830: PP_4830 - precorrin-6Y C(5,15)-methyltransferase, at 5,496,928 to 5,498,139
_4830
PP_4831: PP_4831 - putative cobalt-precorrin-6A synthase, at 5,498,132 to 5,499,226
_4831
PP_4832: PP_4832 - Precorrin-6x reductase, at 5,499,223 to 5,499,942
_4832
PP_4833: PP_4833 - SURF1 domain protein, at 5,500,077 to 5,500,508
_4833
Position (kb) 5498
5499
5500 Strain fitness (log2 ratio) -2
-1
0
1 at 5497.160 kb on + strand, within PP_4830 at 5497.161 kb on + strand, within PP_4830 at 5497.161 kb on + strand, within PP_4830 at 5497.161 kb on + strand, within PP_4830 at 5497.162 kb on - strand, within PP_4830 at 5497.162 kb on - strand, within PP_4830 at 5497.162 kb on - strand, within PP_4830 at 5497.162 kb on - strand, within PP_4830 at 5497.169 kb on - strand, within PP_4830 at 5497.549 kb on - strand, within PP_4830 at 5497.601 kb on - strand, within PP_4830 at 5497.817 kb on + strand, within PP_4830 at 5497.919 kb on + strand, within PP_4830 at 5497.919 kb on + strand, within PP_4830 at 5497.919 kb on + strand, within PP_4830 at 5497.919 kb on + strand, within PP_4830 at 5498.118 kb on - strand at 5498.119 kb on - strand at 5498.179 kb on + strand at 5498.179 kb on + strand at 5498.180 kb on - strand at 5498.180 kb on - strand at 5498.390 kb on + strand, within PP_4831 at 5498.390 kb on + strand, within PP_4831 at 5498.390 kb on + strand, within PP_4831 at 5498.390 kb on + strand, within PP_4831 at 5498.391 kb on - strand, within PP_4831 at 5498.392 kb on + strand, within PP_4831 at 5498.705 kb on + strand, within PP_4831 at 5498.706 kb on - strand, within PP_4831 at 5498.706 kb on - strand, within PP_4831 at 5498.753 kb on + strand, within PP_4831 at 5498.754 kb on - strand, within PP_4831 at 5498.763 kb on + strand, within PP_4831 at 5498.764 kb on - strand, within PP_4831 at 5498.764 kb on - strand, within PP_4831 at 5498.811 kb on - strand, within PP_4831 at 5499.302 kb on - strand, within PP_4832 at 5499.302 kb on - strand, within PP_4832 at 5499.302 kb on - strand, within PP_4832 at 5499.302 kb on - strand, within PP_4832 at 5499.391 kb on + strand, within PP_4832 at 5499.439 kb on + strand, within PP_4832 at 5499.440 kb on - strand, within PP_4832 at 5499.440 kb on - strand, within PP_4832 at 5499.440 kb on - strand, within PP_4832 at 5499.940 kb on + strand at 5499.974 kb on + strand at 5499.974 kb on + strand at 5499.974 kb on + strand at 5500.035 kb on - strand at 5500.071 kb on - strand at 5500.151 kb on - strand, within PP_4833 at 5500.151 kb on - strand, within PP_4833 at 5500.187 kb on + strand, within PP_4833 at 5500.187 kb on + strand, within PP_4833 at 5500.187 kb on + strand, within PP_4833
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt 37C remove 5,497,160 + PP_4830 0.19 -0.3 5,497,161 + PP_4830 0.19 +0.1 5,497,161 + PP_4830 0.19 -2.0 5,497,161 + PP_4830 0.19 +0.4 5,497,162 - PP_4830 0.19 +0.4 5,497,162 - PP_4830 0.19 -0.7 5,497,162 - PP_4830 0.19 +0.4 5,497,162 - PP_4830 0.19 -0.8 5,497,169 - PP_4830 0.20 -0.6 5,497,549 - PP_4830 0.51 -0.7 5,497,601 - PP_4830 0.56 +0.8 5,497,817 + PP_4830 0.73 +0.3 5,497,919 + PP_4830 0.82 +0.1 5,497,919 + PP_4830 0.82 -0.3 5,497,919 + PP_4830 0.82 -0.9 5,497,919 + PP_4830 0.82 +0.2 5,498,118 - -0.4 5,498,119 - +0.3 5,498,179 + +0.5 5,498,179 + +0.3 5,498,180 - +1.0 5,498,180 - +1.4 5,498,390 + PP_4831 0.24 -1.7 5,498,390 + PP_4831 0.24 +0.9 5,498,390 + PP_4831 0.24 +1.4 5,498,390 + PP_4831 0.24 -0.1 5,498,391 - PP_4831 0.24 +0.3 5,498,392 + PP_4831 0.24 -0.3 5,498,705 + PP_4831 0.52 -0.0 5,498,706 - PP_4831 0.52 +0.8 5,498,706 - PP_4831 0.52 -0.9 5,498,753 + PP_4831 0.57 +0.2 5,498,754 - PP_4831 0.57 +1.4 5,498,763 + PP_4831 0.58 -0.2 5,498,764 - PP_4831 0.58 -0.3 5,498,764 - PP_4831 0.58 +0.6 5,498,811 - PP_4831 0.62 -0.4 5,499,302 - PP_4832 0.11 -1.4 5,499,302 - PP_4832 0.11 +0.0 5,499,302 - PP_4832 0.11 +0.9 5,499,302 - PP_4832 0.11 +1.0 5,499,391 + PP_4832 0.23 +0.2 5,499,439 + PP_4832 0.30 +0.6 5,499,440 - PP_4832 0.30 -0.7 5,499,440 - PP_4832 0.30 +0.4 5,499,440 - PP_4832 0.30 -0.8 5,499,940 + +0.5 5,499,974 + +0.5 5,499,974 + -0.6 5,499,974 + -0.0 5,500,035 - +0.2 5,500,071 - +0.5 5,500,151 - PP_4833 0.17 -0.5 5,500,151 - PP_4833 0.17 -0.2 5,500,187 + PP_4833 0.25 +0.1 5,500,187 + PP_4833 0.25 -0.9 5,500,187 + PP_4833 0.25 +1.1
Or see this region's nucleotide sequence