Strain Fitness in Escherichia coli BW25113 around b2875

Experiment: R2_N4_T1_phage10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2_N4_T1_phage10
3,009,654	+	yqeA	b2874	0.18	+2.1
3,009,688	+	yqeA	b2874	0.22	-2.7
3,009,701	-	yqeA	b2874	0.23	-0.3
3,009,701	-	yqeA	b2874	0.23	-2.7
3,009,730	+	yqeA	b2874	0.26	+0.9
3,009,816	-	yqeA	b2874	0.36	+0.7
3,009,822	-	yqeA	b2874	0.36	+0.8
3,009,922	-	yqeA	b2874	0.47	+0.0
3,010,002	+	yqeA	b2874	0.56	-0.5
3,010,013	+	yqeA	b2874	0.57	+1.6
3,010,232	+	yqeA	b2874	0.80	+0.3
3,010,232	+	yqeA	b2874	0.80	+0.4
3,010,280	+	yqeA	b2874	0.85	+0.0
3,010,282	+	yqeA	b2874	0.86	+2.3
3,010,282	+	yqeA	b2874	0.86	+0.2
3,010,349	+				-1.3
3,010,390	+				-0.1
3,010,590	+				-1.3
3,010,596	-				-2.4
3,010,610	+				+2.0
3,010,618	-				+0.9
3,010,618	-				+0.1
3,010,697	-				+0.3
3,010,803	+	yqeB	b2875	0.10	-1.2
3,010,822	-	yqeB	b2875	0.11	-1.8
3,010,822	-	yqeB	b2875	0.11	+0.3
3,010,914	-	yqeB	b2875	0.17	-0.2
3,010,941	+	yqeB	b2875	0.19	-0.9
3,010,952	-	yqeB	b2875	0.19	+1.8
3,010,964	-	yqeB	b2875	0.20	+0.3
3,010,980	-	yqeB	b2875	0.21	-1.1
3,011,204	-	yqeB	b2875	0.35	-0.4
3,011,209	+	yqeB	b2875	0.35	+0.2
3,011,418	-	yqeB	b2875	0.48	+0.2
3,011,469	+	yqeB	b2875	0.51	-2.9
3,011,537	+	yqeB	b2875	0.55	-1.0
3,011,560	+	yqeB	b2875	0.57	-0.7
3,011,597	-	yqeB	b2875	0.59	-0.4
3,011,616	-	yqeB	b2875	0.60	+0.8
3,011,706	-	yqeB	b2875	0.66	+0.8
3,011,918	-	yqeB	b2875	0.79	-1.7
3,011,918	-	yqeB	b2875	0.79	+0.2
3,011,971	+	yqeB	b2875	0.82	-0.6
3,012,000	-	yqeB	b2875	0.84	-0.1
3,012,020	-				-0.5
3,012,020	-	yqeB	b2875	0.85	-0.5
3,012,022	+	yqeB	b2875	0.85	-3.3
3,012,079	-	yqeB	b2875	0.89	+1.1
3,012,079	-	yqeB	b2875	0.89	+1.0
3,012,102	-				-0.3
3,012,147	-				-0.7
3,012,283	-				-0.9
3,012,304	+				-0.2
3,012,378	+				-0.6
3,012,497	-	b2876	b2876	0.24	+1.0
3,012,666	-	b2876	b2876	0.46	+0.2
3,012,666	-	b2876	b2876	0.46	-1.7
3,012,715	+	b2876	b2876	0.53	-0.1
3,012,848	+	b2876	b2876	0.70	+0.1
3,012,888	+	b2876	b2876	0.75	+1.0
3,012,888	+	b2876	b2876	0.75	+4.3
3,012,939	+	b2876	b2876	0.82	-1.2
3,012,947	-	b2876	b2876	0.83	-1.6
3,012,954	+	b2876	b2876	0.84	+1.0
3,013,010	+				+0.9
3,013,010	+				+0.7
3,013,012	-				-1.2
3,013,012	-				-1.6
3,013,026	+				+0.2
3,013,047	+				-0.5
3,013,047	+				+1.3
3,013,052	+				-0.0
3,013,052	+				+1.7
3,013,084	+				-0.1
3,013,121	+				-1.0
3,013,124	-				+0.4
3,013,125	+				+0.4
3,013,138	+				+1.7
3,013,139	+				+0.7
3,013,156	-				+0.4
3,013,166	+				+1.4
3,013,169	-				-1.6
3,013,177	+				-0.6
3,013,177	+				-0.3
3,013,184	+				-1.7
3,013,196	-				+0.4
3,013,198	+				-1.9
3,013,203	-				-2.2
3,013,228	-				-1.6
3,013,228	-				-2.2
3,013,236	-				-0.6
3,013,238	+				-3.5
3,013,241	+	ygfJ	b2877	0.10	+0.1
3,013,242	+	ygfJ	b2877	0.10	+1.0
3,013,248	-	ygfJ	b2877	0.11	+0.4
3,013,253	+	ygfJ	b2877	0.12	-0.8
3,013,253	+	ygfJ	b2877	0.12	-0.3
3,013,254	+	ygfJ	b2877	0.12	-0.4
3,013,254	+	ygfJ	b2877	0.12	-0.3
3,013,254	+	ygfJ	b2877	0.12	-0.8
3,013,256	-	ygfJ	b2877	0.13	-1.9