Strain Fitness in Escherichia coli BW25113 around b3486

Experiment: R1_N4_T2_phage8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R1_N4_T2_phage8
3,623,841	+	yhhJ	b3485	0.12	-0.4
3,623,864	+	yhhJ	b3485	0.14	-3.3
3,623,869	+	yhhJ	b3485	0.15	+2.8
3,623,874	+	yhhJ	b3485	0.15	+0.9
3,623,874	+	yhhJ	b3485	0.15	-3.3
3,623,876	+	yhhJ	b3485	0.15	+0.2
3,623,906	-	yhhJ	b3485	0.18	-0.0
3,623,916	-	yhhJ	b3485	0.19	-3.0
3,623,916	-	yhhJ	b3485	0.19	-3.5
3,623,969	-	yhhJ	b3485	0.24	-2.4
3,624,083	+	yhhJ	b3485	0.34	-3.4
3,624,085	+	yhhJ	b3485	0.34	-1.7
3,624,112	+	yhhJ	b3485	0.36	+0.1
3,624,130	+	yhhJ	b3485	0.38	-1.8
3,624,200	+	yhhJ	b3485	0.44	+0.4
3,624,215	+	yhhJ	b3485	0.46	-0.1
3,624,235	+	yhhJ	b3485	0.47	+1.1
3,624,238	-	yhhJ	b3485	0.48	+0.6
3,624,238	-	yhhJ	b3485	0.48	-2.9
3,624,238	-	yhhJ	b3485	0.48	+1.4
3,624,256	-	yhhJ	b3485	0.49	-3.5
3,624,256	-	yhhJ	b3485	0.49	+0.4
3,624,273	-	yhhJ	b3485	0.51	+0.2
3,624,317	-	yhhJ	b3485	0.55	-1.3
3,624,317	-	yhhJ	b3485	0.55	-4.3
3,624,365	+	yhhJ	b3485	0.59	-1.0
3,624,407	+	yhhJ	b3485	0.63	-0.9
3,624,407	+	yhhJ	b3485	0.63	+1.2
3,624,448	-	yhhJ	b3485	0.66	-0.9
3,624,489	+	yhhJ	b3485	0.70	+1.2
3,624,539	+	yhhJ	b3485	0.74	-3.0
3,624,566	-	yhhJ	b3485	0.77	+2.9
3,624,566	-	yhhJ	b3485	0.77	-2.5
3,624,612	+	yhhJ	b3485	0.81	-3.3
3,624,612	+	yhhJ	b3485	0.81	+2.0
3,624,683	+	yhhJ	b3485	0.87	+0.1
3,624,779	+				-0.1
3,624,878	-				-4.5
3,624,878	-				+1.5
3,624,968	-				-3.5
3,624,968	-				-0.7
3,624,996	+				-1.1
3,624,997	-				+0.3
3,625,130	-	rbbA	b3486	0.11	+1.2
3,625,142	+	rbbA	b3486	0.12	+1.9
3,625,249	-	rbbA	b3486	0.15	+2.1
3,625,264	-	rbbA	b3486	0.16	+0.3
3,625,264	-	rbbA	b3486	0.16	+1.7
3,625,304	-	rbbA	b3486	0.17	+0.0
3,625,304	-	rbbA	b3486	0.17	+0.8
3,625,319	+	rbbA	b3486	0.18	-0.1
3,625,420	-	rbbA	b3486	0.22	+0.7
3,625,420	-	rbbA	b3486	0.22	+0.5
3,625,517	+	rbbA	b3486	0.25	+1.7
3,625,517	+	rbbA	b3486	0.25	+0.5
3,625,520	-	rbbA	b3486	0.25	+0.1
3,625,525	+	rbbA	b3486	0.26	+0.8
3,625,525	-	rbbA	b3486	0.26	+0.8
3,625,528	+	rbbA	b3486	0.26	-3.7
3,625,530	-	rbbA	b3486	0.26	+0.8
3,625,530	-	rbbA	b3486	0.26	-5.0
3,625,533	-	rbbA	b3486	0.26	-3.0
3,625,533	-	rbbA	b3486	0.26	+0.6
3,625,567	+	rbbA	b3486	0.27	+0.3
3,625,678	+	rbbA	b3486	0.31	-0.7
3,625,736	+	rbbA	b3486	0.33	-0.7
3,625,736	+	rbbA	b3486	0.33	+1.5
3,625,736	+	rbbA	b3486	0.33	+0.3
3,625,754	+	rbbA	b3486	0.34	+1.5
3,625,779	+	rbbA	b3486	0.35	-2.0
3,625,779	+	rbbA	b3486	0.35	+1.7
3,625,794	-	rbbA	b3486	0.35	-3.7
3,625,794	-	rbbA	b3486	0.35	+2.5
3,625,802	-	rbbA	b3486	0.36	+0.1
3,625,864	+	rbbA	b3486	0.38	+0.7
3,625,864	+	rbbA	b3486	0.38	-0.4
3,625,910	-	rbbA	b3486	0.40	-1.3
3,625,946	-	rbbA	b3486	0.41	-0.6
3,625,946	-	rbbA	b3486	0.41	-0.3
3,625,983	-	rbbA	b3486	0.42	+0.0
3,625,983	-	rbbA	b3486	0.42	-0.4
3,626,003	+	rbbA	b3486	0.43	-2.9
3,626,098	-	rbbA	b3486	0.46	+0.7
3,626,098	-	rbbA	b3486	0.46	+1.8
3,626,099	-	rbbA	b3486	0.47	-0.5
3,626,099	-	rbbA	b3486	0.47	-0.0
3,626,119	-	rbbA	b3486	0.47	-4.1
3,626,119	-	rbbA	b3486	0.47	-2.4
3,626,121	+	rbbA	b3486	0.47	+0.3
3,626,156	+	rbbA	b3486	0.49	+0.1
3,626,191	+	rbbA	b3486	0.50	+1.5
3,626,238	+	rbbA	b3486	0.52	+0.8
3,626,306	-	rbbA	b3486	0.54	+1.3
3,626,368	+	rbbA	b3486	0.56	-0.1
3,626,368	+	rbbA	b3486	0.56	-3.5
3,626,398	-	rbbA	b3486	0.57	-3.9
3,626,398	-	rbbA	b3486	0.57	+2.3
3,626,458	+	rbbA	b3486	0.60	-0.3
3,626,511	+	rbbA	b3486	0.62	+0.4
3,626,581	+	rbbA	b3486	0.64	+1.6
3,626,617	-	rbbA	b3486	0.65	-0.1
3,626,617	-	rbbA	b3486	0.65	-0.7
3,626,720	-	rbbA	b3486	0.69	-4.8
3,626,767	+	rbbA	b3486	0.71	+0.4
3,626,771	+	rbbA	b3486	0.71	+0.2
3,626,771	+	rbbA	b3486	0.71	+0.7
3,626,775	-	rbbA	b3486	0.71	+1.7
3,626,784	-	rbbA	b3486	0.72	+0.3
3,626,889	+	rbbA	b3486	0.75	+0.3
3,626,899	+	rbbA	b3486	0.76	-1.4
3,626,899	+	rbbA	b3486	0.76	-0.3
3,626,958	+	rbbA	b3486	0.78	-0.8
3,626,979	+	rbbA	b3486	0.79	-0.3
3,627,030	+	rbbA	b3486	0.81	+0.1
3,627,060	+	rbbA	b3486	0.82	+1.3
3,627,060	+	rbbA	b3486	0.82	-1.2
3,627,072	+	rbbA	b3486	0.82	-0.2
3,627,081	-	rbbA	b3486	0.82	+1.7
3,627,081	-	rbbA	b3486	0.82	-1.3
3,627,090	+	rbbA	b3486	0.83	+0.2
3,627,090	+	rbbA	b3486	0.83	-2.8
3,627,126	-	rbbA	b3486	0.84	+1.3
3,627,166	-	rbbA	b3486	0.86	+0.0
3,627,359	-				+1.4
3,627,366	+				-0.6
3,627,448	-				+0.4
3,627,448	-				+1.4
3,627,448	-				+2.0
3,627,449	-				-0.2
3,627,463	-				-1.4
3,627,581	-				-0.7
3,627,611	+				+0.9
3,627,611	+				-4.0
3,627,617	+				+0.2
3,627,617	+				+0.5
3,627,617	+				-3.4
3,627,660	+				+1.3
3,627,714	-	yhiI	b3487	0.15	+1.6
3,627,750	-	yhiI	b3487	0.18	-1.2
3,627,836	+	yhiI	b3487	0.26	+1.3
3,627,854	-	yhiI	b3487	0.28	-1.8
3,627,903	+	yhiI	b3487	0.32	-0.2
3,627,906	-	yhiI	b3487	0.33	-1.7
3,627,906	-	yhiI	b3487	0.33	-0.9
3,627,938	-	yhiI	b3487	0.36	+0.3
3,628,055	-	yhiI	b3487	0.47	-0.4
3,628,063	+	yhiI	b3487	0.47	-1.6
3,628,066	-	yhiI	b3487	0.48	+0.2
3,628,199	+	yhiI	b3487	0.60	-0.4
3,628,223	+	yhiI	b3487	0.62	+1.0
3,628,223	+	yhiI	b3487	0.62	+1.1
3,628,236	+	yhiI	b3487	0.63	+0.7
3,628,244	-	yhiI	b3487	0.64	-0.0
3,628,269	-	yhiI	b3487	0.67	+0.5
3,628,303	+	yhiI	b3487	0.70	-1.2
3,628,307	-	yhiI	b3487	0.70	+0.5
3,628,307	-	yhiI	b3487	0.70	+0.3
3,628,347	-	yhiI	b3487	0.74	-1.6
3,628,365	-	yhiI	b3487	0.76	+0.1
3,628,426	-	yhiI	b3487	0.81	+0.0
3,628,426	-	yhiI	b3487	0.81	+0.6
3,628,506	+	yhiI	b3487	0.89	-0.4