Strain Fitness in Escherichia coli BW25113 around b1625

Experiment: LB + carbenicillin Time8hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB + carbenicillin Time8hr
1,701,988	+	b1624	b1624	0.67	-0.5
1,701,988	+	b1624	b1624	0.67	+0.3
1,702,175	-	b1624	b1624	0.85	+0.5
1,702,296	-				-0.8
1,702,375	+				+0.1
1,702,382	-				+1.0
1,702,402	-				+1.0
1,702,402	-				+1.0
1,702,418	-				-0.0
1,702,423	+				+0.1
1,702,425	+				-0.4
1,702,425	+				-0.7
1,702,541	-				+1.0
1,702,546	-				+1.0
1,702,553	+				-0.0
1,702,553	+				+1.0
1,702,560	-				-0.0
1,702,560	-				+3.0
1,702,565	-				+1.0
1,702,569	+				+0.1
1,702,569	-				+1.5
1,702,569	-				+3.3
1,702,572	+				-0.0
1,702,626	+	blr	b4409	0.40	+0.0
1,702,634	-	blr	b4409	0.47	-0.0
1,702,638	-	blr	b4409	0.50	+1.0
1,702,648	+	blr	b4409	0.58	+0.8
1,702,651	-	blr	b4409	0.60	+2.6
1,702,657	+	blr	b4409	0.65	+0.1
1,702,658	-	blr	b4409	0.66	+1.0
1,702,661	+	blr	b4409	0.68	-0.1
1,702,666	+	blr	b4409	0.72	-0.0
1,702,671	+	blr	b4409	0.76	+0.1
1,702,671	+	blr	b4409	0.76	-0.2
1,702,673	+	blr	b4409	0.78	-0.3
1,702,679	-	blr	b4409	0.83	+1.0
1,702,694	+				+0.3
1,702,694	-				+1.0
1,702,715	+				-0.3
1,702,725	+				-0.1
1,702,725	+				-0.4
1,702,725	+				-0.4
1,702,812	+				-1.2
1,702,812	+				-0.0
1,702,821	+				+0.5
1,702,979	+				+0.1
1,702,984	+				+1.0
1,702,984	+				+1.0
1,702,987	-				+0.4
1,702,987	-				+0.4
1,702,987	-				+0.5
1,702,990	-				+0.2
1,702,992	-				+0.8
1,703,033	-	ydgT	b1625	0.28	-0.0
1,703,052	+	ydgT	b1625	0.37	+1.0
1,703,054	-	ydgT	b1625	0.38	-0.0
1,703,054	-	ydgT	b1625	0.38	+0.8
1,703,055	+	ydgT	b1625	0.38	+1.4
1,703,070	+	ydgT	b1625	0.45	+0.1
1,703,070	+	ydgT	b1625	0.45	+0.1
1,703,070	+	ydgT	b1625	0.45	-0.0
1,703,070	+	ydgT	b1625	0.45	+0.4
1,703,070	+	ydgT	b1625	0.45	+1.0
1,703,078	-	ydgT	b1625	0.49	+1.8
1,703,078	-	ydgT	b1625	0.49	-0.5
1,703,081	+	ydgT	b1625	0.50	+1.2
1,703,084	+	ydgT	b1625	0.51	+0.3
1,703,089	+	ydgT	b1625	0.54	+0.6
1,703,092	-	ydgT	b1625	0.55	+0.0
1,703,102	-	ydgT	b1625	0.60	+0.6
1,703,105	-	ydgT	b1625	0.61	-0.2
1,703,109	+	ydgT	b1625	0.63	-0.2
1,703,109	+	ydgT	b1625	0.63	+0.1
1,703,142	-	ydgT	b1625	0.78	-0.1
1,703,153	-	ydgT	b1625	0.83	+0.0
1,703,178	+				+0.5
1,703,210	-				-0.2
1,703,263	-				-0.6
1,703,268	-				+0.7
1,703,276	+				+0.2
1,703,278	-				-0.3
1,703,296	+				-0.4
1,703,296	+				-0.2
1,703,368	-	b1626	b1626	0.21	+0.7
1,703,368	-	b1626	b1626	0.21	+0.3
1,703,369	+	b1626	b1626	0.22	+0.8
1,703,377	-	b1626	b1626	0.23	+1.2
1,703,377	-	b1626	b1626	0.23	-0.3
1,703,377	-	b1626	b1626	0.23	-0.2
1,703,380	-	b1626	b1626	0.24	-0.0
1,703,380	-	b1626	b1626	0.24	+0.1
1,703,424	+	b1626	b1626	0.34	+0.4
1,703,427	-	b1626	b1626	0.35	-0.8
1,703,427	-	b1626	b1626	0.35	+0.7
1,703,480	+	b1626	b1626	0.47	-2.2
1,703,495	+	b1626	b1626	0.50	+0.4
1,703,503	-	b1626	b1626	0.52	-0.3
1,703,518	-	b1626	b1626	0.55	-0.3
1,703,518	-	b1626	b1626	0.55	+0.2
1,703,527	+	b1626	b1626	0.57	-0.0
1,703,537	+	b1626	b1626	0.60	-0.4
1,703,542	+	b1626	b1626	0.61	+0.3
1,703,542	+	b1626	b1626	0.61	+0.2
1,703,549	-	b1626	b1626	0.62	-0.1
1,703,609	+	b1626	b1626	0.76	+0.5
1,703,617	-	b1626	b1626	0.78	-0.2
1,703,670	+	b1626	b1626	0.90	+0.5
1,703,671	-				+0.1
1,703,671	-				+0.2
1,703,819	+				+0.1
1,703,827	-				-0.5
1,703,845	-				-0.7
1,703,847	+				+0.3
1,703,861	+	rsxA	b1627	0.12	-0.5
1,703,861	+	rsxA	b1627	0.12	-0.5
1,703,908	-	rsxA	b1627	0.20	-0.1
1,704,048	+	rsxA	b1627	0.44	+0.3
1,704,090	-	rsxA	b1627	0.51	+0.2