Strain Fitness in Escherichia coli BW25113 around b1919

Experiment: LB + ciprofloxacin Time48hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB + ciprofloxacin Time48hr
1,995,592	+	yecC	b1917	0.67	+0.6
1,995,598	-	yecC	b1917	0.68	-0.2
1,995,598	-	yecC	b1917	0.68	+0.1
1,995,688	+	yecC	b1917	0.80	+0.6
1,995,771	-				+0.2
1,995,777	-				-0.3
1,995,777	-				-0.5
1,995,779	+				-0.1
1,995,779	+				+0.1
1,995,779	+				+0.4
1,995,779	+				-0.0
1,995,880	+				+0.1
1,995,880	+				+1.2
1,995,968	+	yecS	b1918	0.20	+0.3
1,995,976	-	yecS	b1918	0.21	-0.1
1,996,355	+	yecS	b1918	0.78	-0.5
1,996,445	-				-0.0
1,996,445	-				+1.0
1,996,446	-				+0.2
1,996,778	-	yedO	b1919	0.26	+0.8
1,997,064	-	yedO	b1919	0.55	+0.4
1,997,231	-	yedO	b1919	0.72	+1.3
1,997,231	-	yedO	b1919	0.72	-0.2
1,997,256	-	yedO	b1919	0.75	-0.2
1,997,658	+				+0.4
1,997,811	+	fliY	b1920	0.25	+0.1
1,997,811	+	fliY	b1920	0.25	-0.7
1,997,931	-	fliY	b1920	0.40	+0.3
1,998,266	+	fliY	b1920	0.82	-0.6
1,998,375	+				-0.8
1,998,375	+				-0.2
1,998,387	-				-0.1