Strain Fitness in Escherichia coli BW25113 around b1049

Experiment: LB + ciprofloxacin Time9hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB + ciprofloxacin Time9hr
1,109,233	-	mdoG	b1048	0.44	-0.5
1,109,324	-				+0.3
1,109,386	+	mdoG	b1048	0.54	-0.0
1,109,386	+	mdoG	b1048	0.54	-2.4
1,109,388	+	mdoG	b1048	0.54	-1.1
1,109,395	-	mdoG	b1048	0.54	+2.3
1,109,425	+	mdoG	b1048	0.56	-2.0
1,109,425	+	mdoG	b1048	0.56	-0.7
1,109,493	+	mdoG	b1048	0.61	-1.5
1,109,493	+	mdoG	b1048	0.61	-0.2
1,109,501	-	mdoG	b1048	0.61	-0.8
1,109,501	-	mdoG	b1048	0.61	+0.4
1,109,501	-	mdoG	b1048	0.61	-0.2
1,109,704	-	mdoG	b1048	0.75	+0.3
1,109,704	-	mdoG	b1048	0.75	-2.1
1,109,785	-	mdoG	b1048	0.80	-1.7
1,109,806	-	mdoG	b1048	0.81	-0.5
1,109,945	+				+0.3
1,109,954	-				-0.7
1,110,148	+				+0.6
1,110,215	+				-0.0
1,110,215	+				+0.5
1,110,259	-				-0.3
1,110,259	-				-0.3
1,110,260	+				-1.1
1,110,269	-				-0.2
1,110,432	-	mdoH	b1049	0.14	-0.9
1,110,432	-	mdoH	b1049	0.14	-1.2
1,110,546	+				+0.3
1,110,546	+				-0.3
1,110,546	+	mdoH	b1049	0.18	-1.0
1,110,554	-	mdoH	b1049	0.18	+0.4
1,110,554	-	mdoH	b1049	0.18	-0.4
1,110,606	-	mdoH	b1049	0.20	-0.7
1,110,645	-	mdoH	b1049	0.22	+0.7
1,110,645	-	mdoH	b1049	0.22	+2.3
1,110,651	-	mdoH	b1049	0.22	-1.2
1,110,665	+	mdoH	b1049	0.23	-0.7
1,110,678	+	mdoH	b1049	0.23	-0.9
1,110,678	+	mdoH	b1049	0.23	-0.1
1,110,763	+				-0.7
1,110,800	+	mdoH	b1049	0.28	-0.3
1,110,924	+	mdoH	b1049	0.33	-0.5
1,110,924	+	mdoH	b1049	0.33	-1.5
1,110,942	+	mdoH	b1049	0.34	-0.3
1,110,950	-	mdoH	b1049	0.34	+0.3
1,110,950	-	mdoH	b1049	0.34	+1.3
1,111,075	+	mdoH	b1049	0.39	+0.3
1,111,097	+	mdoH	b1049	0.40	-0.9
1,111,099	+	mdoH	b1049	0.40	-0.2
1,111,099	+	mdoH	b1049	0.40	-1.0
1,111,183	+	mdoH	b1049	0.43	-2.1
1,111,276	-	mdoH	b1049	0.47	-0.7
1,111,276	-	mdoH	b1049	0.47	-0.8
1,111,290	-	mdoH	b1049	0.47	-0.2
1,111,421	-	mdoH	b1049	0.52	-2.5
1,111,432	-	mdoH	b1049	0.53	-1.8
1,111,448	+	mdoH	b1049	0.54	-1.1
1,111,481	+	mdoH	b1049	0.55	-0.7
1,111,591	+	mdoH	b1049	0.59	-0.6
1,111,591	+	mdoH	b1049	0.59	-0.4
1,111,599	+	mdoH	b1049	0.59	-0.2
1,111,606	-	mdoH	b1049	0.60	+1.0
1,111,630	-	mdoH	b1049	0.61	-0.9
1,111,633	-	mdoH	b1049	0.61	-0.9
1,111,641	+	mdoH	b1049	0.61	-0.9
1,111,686	+	mdoH	b1049	0.63	-0.1
1,111,686	+	mdoH	b1049	0.63	-1.0
1,111,745	+	mdoH	b1049	0.65	-0.9
1,111,811	+	mdoH	b1049	0.68	-0.4
1,111,903	-	mdoH	b1049	0.71	+0.1
1,111,938	+	mdoH	b1049	0.73	-0.8
1,111,949	+	mdoH	b1049	0.73	-0.7
1,111,989	+	mdoH	b1049	0.75	-0.2
1,112,054	+	mdoH	b1049	0.77	-0.1
1,112,082	+	mdoH	b1049	0.78	-1.4
1,112,085	-	mdoH	b1049	0.79	+0.5
1,112,096	+	mdoH	b1049	0.79	-0.6
1,112,136	-	mdoH	b1049	0.81	+0.3
1,112,162	-	mdoH	b1049	0.82	-0.3
1,112,178	+	mdoH	b1049	0.82	-0.8
1,112,261	-	mdoH	b1049	0.85	-0.3
1,112,269	+	mdoH	b1049	0.86	-0.9
1,112,344	-	mdoH	b1049	0.89	+2.3
1,112,478	+				-1.0
1,112,561	-				-0.0
1,112,670	-				-0.2
1,112,866	+	yceK	b1050	0.28	+1.1
1,113,040	+				+1.6
1,113,040	+				+0.5
1,113,311	-	msyB	b1051	0.75	-0.2
1,113,311	-	msyB	b1051	0.75	-0.5
1,113,450	-				+0.3
1,113,524	-				+0.4
1,113,533	+				+0.3
1,113,533	+				+0.4