Strain Fitness in Pseudomonas putida KT2440 around PP_5079

Experiment: P. put PUT 10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put PUT 10 MOI 1
5,800,965	-				-1.6
5,800,978	-				-2.4
5,801,062	+				-1.8
5,801,062	+				+0.7
5,801,674	-				-0.2
5,801,704	+				-0.5
5,801,704	+				-1.2
5,801,705	-				-0.7
5,801,705	-				-0.5
5,801,838	+		PP_5080	0.20	+0.2
5,801,839	-		PP_5080	0.20	+0.3
5,801,928	+		PP_5080	0.27	-0.1
5,801,929	-		PP_5080	0.27	+0.5
5,801,995	+		PP_5080	0.32	-0.4
5,802,215	-		PP_5080	0.50	+0.8
5,802,254	-		PP_5080	0.53	+0.7
5,802,275	+		PP_5080	0.55	+0.3