Strain Fitness in Pseudomonas putida KT2440 around PP_2902

Experiment: P. put PUT 10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put PUT 10 MOI 1
3,299,234	+		PP_2901	0.63	+1.1
3,299,235	-		PP_2901	0.63	-0.2
3,299,235	-		PP_2901	0.63	+0.5
3,299,290	+		PP_2901	0.65	+0.0
3,299,375	+				-0.5
3,299,381	+		PP_2901	0.69	-0.6
3,299,381	+				+1.3
3,299,382	-				-1.8
3,299,382	-		PP_2901	0.69	-0.8
3,299,419	+		PP_2901	0.71	+0.2
3,299,419	+		PP_2901	0.71	-0.1
3,299,419	+		PP_2901	0.71	+1.4
3,299,419	+		PP_2901	0.71	+0.2
3,299,419	+		PP_2901	0.71	-0.3
3,299,419	+		PP_2901	0.71	+0.0
3,299,420	-		PP_2901	0.71	+0.4
3,299,420	-		PP_2901	0.71	+0.1
3,299,539	-		PP_2901	0.76	+0.2
3,299,666	+		PP_2901	0.81	-0.9
3,299,772	+		PP_2901	0.86	-0.2
3,299,772	+		PP_2901	0.86	-0.3
3,299,772	+		PP_2901	0.86	+0.1
3,299,773	-		PP_2901	0.86	-0.2
3,299,809	+		PP_2901	0.87	+0.6
3,299,809	+		PP_2901	0.87	-0.1
3,299,809	+		PP_2901	0.87	-0.4
3,299,809	+		PP_2901	0.87	-0.4
3,299,810	-		PP_2901	0.87	-0.8
3,299,810	-		PP_2901	0.87	-0.3
3,299,821	+		PP_2901	0.88	-1.7
3,299,872	+				+0.7
3,299,872	+				+0.3
3,299,873	-				-0.6
3,300,180	-				+0.5
3,301,292	-		PP_2903	0.78	-1.4
3,301,292	-		PP_2903	0.78	-1.1
3,301,292	-		PP_2903	0.78	-0.5
3,301,596	+				-2.5
3,301,596	+				-1.9