Strain Fitness in Pseudomonas putida KT2440 around PP_1807

Experiment: P. put PUT 10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put PUT 10 MOI 1
2,030,521	-		PP_1806	0.15	+1.6
2,030,571	+		PP_1806	0.21	-1.5
2,030,572	-		PP_1806	0.21	-0.2
2,030,665	+		PP_1806	0.31	-1.8
2,030,666	-		PP_1806	0.31	-1.3
2,030,790	+		PP_1806	0.44	-0.5
2,030,791	-		PP_1806	0.44	-1.5
2,030,821	-		PP_1806	0.47	-0.6
2,030,969	+		PP_1806	0.62	+0.4
2,031,081	+		PP_1806	0.74	-0.2
2,031,096	+		PP_1806	0.76	-0.1
2,031,161	+		PP_1806	0.82	-1.0
2,031,229	+		PP_1806	0.90	+0.4
2,031,229	+		PP_1806	0.90	+1.2
2,031,229	+		PP_1806	0.90	+0.1
2,031,229	+		PP_1806	0.90	-0.7
2,031,229	+		PP_1806	0.90	+0.8
2,031,230	-		PP_1806	0.90	-1.0
2,031,230	-		PP_1806	0.90	-0.2
2,031,337	+				+0.7
2,031,341	+				-2.2
2,031,342	-				+0.2
2,031,398	+				+0.2
2,031,399	-				+0.5
2,031,404	-				-0.1
2,031,410	+				-3.0
2,031,588	+		PP_1807	0.22	-3.0
2,031,588	+		PP_1807	0.22	-2.1
2,031,589	-		PP_1807	0.22	-1.3
2,031,686	+		PP_1807	0.34	-2.6
2,031,686	+		PP_1807	0.34	-2.5
2,031,686	+		PP_1807	0.34	-3.5
2,031,687	-		PP_1807	0.34	-0.2
2,031,687	-		PP_1807	0.34	-1.0
2,031,687	-		PP_1807	0.34	-1.9
2,031,687	-		PP_1807	0.34	-0.7
2,031,795	-		PP_1807	0.47	-0.3
2,031,795	-		PP_1807	0.47	-1.2
2,031,795	-		PP_1807	0.47	-1.6
2,031,882	+		PP_1807	0.57	-1.4
2,031,882	+		PP_1807	0.57	-2.7
2,031,882	+		PP_1807	0.57	-1.7
2,031,882	+		PP_1807	0.57	-2.7
2,031,882	+		PP_1807	0.57	-2.0
2,031,882	+		PP_1807	0.57	-2.7
2,031,883	-		PP_1807	0.57	-1.6
2,031,883	-		PP_1807	0.57	-1.0
2,031,883	-		PP_1807	0.57	-1.2
2,031,883	-		PP_1807	0.57	-0.4
2,032,049	-		PP_1807	0.77	-1.4
2,032,049	-		PP_1807	0.77	+0.0
2,032,099	+		PP_1807	0.83	-3.0
2,032,099	+		PP_1807	0.83	-0.8
2,032,099	+		PP_1807	0.83	-2.9
2,032,099	+		PP_1807	0.83	-4.4
2,032,099	+		PP_1807	0.83	-3.3
2,032,100	-		PP_1807	0.83	-1.2
2,032,132	+		PP_1807	0.87	-4.5
2,032,132	+				-1.2
2,032,133	-		PP_1807	0.87	-0.4
2,032,133	-		PP_1807	0.87	-1.2
2,032,133	-		PP_1807	0.87	-1.6
2,032,133	-		PP_1807	0.87	-0.8
2,032,148	+		PP_1807	0.88	-1.6
2,032,149	-		PP_1807	0.89	-2.2
2,032,256	+				-3.3
2,032,264	+				-2.3
2,032,296	+				-1.5
2,032,299	+				-2.5
2,032,299	+				-4.8
2,032,299	+				-3.2
2,032,299	+				-2.5
2,032,299	+				-3.5
2,032,300	-				+0.7
2,032,300	-				-0.2
2,032,446	+				-1.6
2,032,446	+				-0.2
2,032,446	+				-2.8
2,032,446	+				-1.7
2,032,446	+				-0.7
2,032,446	+				-2.3
2,032,446	+				-1.4
2,032,447	-				+0.1
2,032,448	+				-1.0
2,032,448	+				+0.3
2,032,449	-				-0.4
2,032,449	-				+1.3
2,032,449	-				+2.3
2,032,449	-				+0.5
2,032,482	+				+0.3
2,032,482	+				+0.2
2,032,483	-				+0.0
2,032,483	-				+0.9
2,032,483	-				+0.1
2,032,501	+				-1.7
2,032,502	-				-0.5
2,032,529	+				+0.3
2,032,529	+				+0.3
2,032,529	+				-0.1
2,032,530	-				+1.4
2,032,534	+				-0.1
2,032,534	+				+1.5
2,032,535	-				+0.4