Strain Fitness in Pseudomonas putida KT2440 around PP_1343

Experiment: P. put PUT 10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put PUT 10 MOI 1
1,530,229	+				-1.3
1,530,229	+				-2.9
1,530,229	+				-0.9
1,530,229	+				-3.5
1,530,251	+				+0.3
1,531,196	+				+1.6
1,531,196	+				+1.7
1,531,196	+				+1.9
1,531,213	+				+1.3
1,531,213	+				+1.4
1,531,213	+				+2.5
1,531,214	-				+2.1
1,531,214	-				+0.7
1,531,214	-				+0.5
1,531,222	-				-0.9
1,531,695	-		PP_1344	0.71	+2.1
1,531,695	-		PP_1344	0.71	+1.5
1,531,734	+		PP_1344	0.77	+1.2
1,531,804	+		PP_1344	0.89	-0.6
1,531,909	+				-3.0
1,531,939	+				-1.3