Strain Fitness in Pseudomonas putida KT2440 around PP_0789

Experiment: P. put PUT 10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put PUT 10 MOI 1
904,998	-		PP_0788	0.58	+0.3
904,998	-		PP_0788	0.58	+0.5
905,004	+		PP_0788	0.58	+0.3
905,104	-		PP_0788	0.63	+0.6
905,261	+		PP_0788	0.70	+0.0
905,261	+		PP_0788	0.70	-0.6
905,261	+		PP_0788	0.70	-0.9
905,429	+		PP_0788	0.78	+0.8
905,430	-		PP_0788	0.78	-0.0
905,430	-		PP_0788	0.78	-0.3
905,430	-		PP_0788	0.78	-1.2
905,430	-		PP_0788	0.78	+0.4
905,502	+		PP_0788	0.81	+0.7
905,503	-		PP_0788	0.82	-0.7
905,553	-		PP_0788	0.84	-0.3
905,868	-				-0.1
905,900	-				+0.2
905,900	-				+2.2
905,912	+				+0.8
905,912	+				-1.0
905,912	+				+0.8
905,913	-				+0.6
905,913	-				+2.6
905,913	-				-0.2
905,913	-				+0.7
905,951	+				-0.1
906,002	+				-4.7
906,002	+				-5.2
906,002	+				-4.7
906,003	-				-2.7
906,188	+		PP_0789	0.35	-3.0
906,188	+		PP_0789	0.35	-3.4
906,325	+		PP_0789	0.58	-3.0
906,326	-		PP_0789	0.59	-4.2
906,374	+		PP_0789	0.67	+0.6
906,376	+		PP_0789	0.67	-5.0
906,376	+		PP_0789	0.67	-4.7
906,377	-		PP_0789	0.68	+1.6
906,377	-		PP_0789	0.68	-5.1
906,643	-		PP_0790	0.10	-0.3
906,643	-		PP_0790	0.10	-0.5
906,766	+		PP_0790	0.25	-0.0
906,766	+		PP_0790	0.25	+0.5
906,767	-		PP_0790	0.25	-0.1
906,767	-		PP_0790	0.25	+0.9
906,809	-		PP_0790	0.30	-1.1
906,960	+		PP_0790	0.48	-0.8
906,961	-		PP_0790	0.48	+0.5
906,961	-		PP_0790	0.48	+0.5
907,063	-		PP_0790	0.61	+0.0
907,063	-		PP_0790	0.61	+0.8
907,554	+		PP_0791	0.15	-0.5