Strain Fitness in Pseudomonas putida KT2440 around PP_2147

Experiment: P. put South MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put South MOI 1
2,450,101	+		PP_2146	0.70	-0.8
2,450,102	-		PP_2146	0.70	-0.5
2,450,102	-		PP_2146	0.70	-2.1
2,450,102	-		PP_2146	0.70	+0.1
2,450,102	-		PP_2146	0.70	-0.5
2,450,136	-		PP_2146	0.71	+0.1
2,450,168	-		PP_2146	0.72	+0.6
2,450,168	-		PP_2146	0.72	-2.0
2,450,168	-		PP_2146	0.72	-0.4
2,450,178	-		PP_2146	0.73	+1.2
2,450,241	+		PP_2146	0.75	+1.0
2,450,242	-		PP_2146	0.75	-0.2
2,450,242	-		PP_2146	0.75	-0.6
2,450,244	+		PP_2146	0.75	+1.0
2,450,244	+		PP_2146	0.75	+0.1
2,450,245	-		PP_2146	0.75	+0.2
2,450,292	+		PP_2146	0.76	-0.5
2,450,292	+		PP_2146	0.76	-0.6
2,450,584	+		PP_2146	0.85	-0.4
2,450,655	+		PP_2146	0.87	+0.2
2,450,655	+		PP_2146	0.87	-0.4
2,450,886	-				+0.2
2,450,994	+				-1.7
2,450,995	-				+0.4
2,451,088	+				-1.2
2,451,088	+				-0.6
2,451,088	+				-1.6
2,451,089	-				-0.5
2,451,427	+		PP_2147	0.59	+0.1
2,451,589	+		PP_2147	0.88	+0.1
2,451,590	-		PP_2147	0.88	-0.2
2,451,590	-		PP_2147	0.88	-0.1
2,451,713	+				-5.2
2,451,781	+				-2.7
2,451,781	+				-3.7
2,451,782	-				-2.9
2,452,066	+		PP_2148	0.12	-2.3
2,452,066	+		PP_2148	0.12	-4.2
2,452,067	-		PP_2148	0.12	+0.8
2,452,067	-		PP_2148	0.12	-1.0
2,452,189	+		PP_2148	0.15	-2.7
2,452,361	+		PP_2148	0.20	-2.7
2,452,361	+		PP_2148	0.20	-1.9
2,452,375	+		PP_2148	0.20	-3.7
2,452,375	+		PP_2148	0.20	-1.3
2,452,541	-		PP_2148	0.25	-1.5