Strain Fitness in Pseudomonas putida KT2440 around PP_5111

Experiment: P. put South MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. put South MOI 1
5,829,675	+		PP_5109	0.69	-0.2
5,829,973	+				+1.7
5,829,974	-				-1.0
5,829,974	-				-0.8
5,830,088	-		PP_5110	0.15	-0.2
5,830,283	-		PP_5110	0.44	+0.3
5,832,217	-				+0.2
5,832,217	-				+0.2
5,832,217	-				+0.7
5,832,256	-				-0.7
5,832,365	+				-2.2
5,832,365	+				-0.1
5,832,374	+				+1.3
5,832,375	-				-1.8
5,832,375	-				-0.9
5,832,375	-				-3.5
5,832,385	+				-1.2
5,832,546	+		PP_5112	0.13	+0.2
5,832,546	+		PP_5112	0.13	-0.8
5,832,547	-		PP_5112	0.13	-2.3
5,832,564	+		PP_5112	0.14	+0.5
5,832,565	-		PP_5112	0.14	+0.3
5,832,705	+		PP_5112	0.24	-1.7
5,832,705	+		PP_5112	0.24	+0.9
5,832,705	+		PP_5112	0.24	-0.9
5,832,706	-		PP_5112	0.24	-1.8
5,832,714	+		PP_5112	0.25	-0.8
5,832,714	+		PP_5112	0.25	-0.5
5,832,717	+		PP_5112	0.25	-0.7
5,832,717	+		PP_5112	0.25	+1.2
5,832,717	+		PP_5112	0.25	-0.7
5,832,718	-		PP_5112	0.25	-1.3
5,832,718	-		PP_5112	0.25	-2.3
5,832,984	+		PP_5112	0.45	+0.4
5,832,984	+		PP_5112	0.45	+0.3
5,832,985	-		PP_5112	0.45	-0.3
5,832,996	+		PP_5112	0.46	+0.9
5,833,071	+		PP_5112	0.51	-0.2