Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0507 and PP_0508 are separated by 0 nucleotides PP_0508 and PP_0509 are separated by 130 nucleotides PP_0509 and PP_0510 are separated by 151 nucleotides
PP_0507: PP_0507 - putative ABC efflux transporter, ATP-binding protein, at 596,153 to 596,863
_0507
PP_0508: PP_0508 - conserved exported protein of unknown function, at 596,864 to 597,445
_0508
PP_0509: PP_0509 - conserved protein of unknown function, at 597,576 to 597,920
_0509
PP_0510: PP_0510 - Thioredoxin, at 598,072 to 598,944
_0510
Position (kb) 597
598 Strain fitness (log2 ratio) -1
0
1 at 596.599 kb on + strand, within PP_0507 at 596.599 kb on + strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.602 kb on - strand, within PP_0507 at 596.602 kb on - strand, within PP_0507 at 597.024 kb on + strand, within PP_0508 at 597.025 kb on - strand, within PP_0508 at 597.025 kb on - strand, within PP_0508 at 597.295 kb on + strand, within PP_0508 at 597.327 kb on - strand, within PP_0508 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.679 kb on + strand, within PP_0509 at 597.904 kb on - strand at 597.904 kb on - strand at 598.192 kb on - strand, within PP_0510 at 598.232 kb on + strand, within PP_0510 at 598.233 kb on - strand, within PP_0510 at 598.311 kb on + strand, within PP_0510 at 598.311 kb on + strand, within PP_0510 at 598.466 kb on + strand, within PP_0510 at 598.466 kb on + strand, within PP_0510 at 598.516 kb on + strand, within PP_0510 at 598.517 kb on - strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 596,599 + PP_0507 0.63 -0.1 596,599 + PP_0507 0.63 -0.1 596,600 - PP_0507 0.63 -0.7 596,600 - PP_0507 0.63 +0.2 596,600 - PP_0507 0.63 -0.6 596,600 - PP_0507 0.63 +1.1 596,600 - PP_0507 0.63 -0.6 596,601 + PP_0507 0.63 +0.4 596,601 + PP_0507 0.63 +0.3 596,601 + PP_0507 0.63 -1.1 596,601 + PP_0507 0.63 +1.7 596,602 - PP_0507 0.63 -0.1 596,602 - PP_0507 0.63 -0.4 597,024 + PP_0508 0.27 +0.4 597,025 - PP_0508 0.28 +0.3 597,025 - PP_0508 0.28 +0.7 597,295 + PP_0508 0.74 -0.6 597,327 - PP_0508 0.80 -0.5 597,630 - PP_0509 0.16 +0.8 597,630 - PP_0509 0.16 +0.0 597,630 - PP_0509 0.16 +0.6 597,630 - PP_0509 0.16 -0.0 597,679 + PP_0509 0.30 +0.1 597,904 - -0.7 597,904 - +0.1 598,192 - PP_0510 0.14 -0.1 598,232 + PP_0510 0.18 +0.4 598,233 - PP_0510 0.18 +1.1 598,311 + PP_0510 0.27 +0.3 598,311 + PP_0510 0.27 -0.5 598,466 + PP_0510 0.45 -0.1 598,466 + PP_0510 0.45 +0.2 598,516 + PP_0510 0.51 -0.9 598,517 - PP_0510 0.51 +0.2 598,606 + PP_0510 0.61 -0.0 598,606 + PP_0510 0.61 +0.3 598,606 + PP_0510 0.61 -0.7 598,607 - PP_0510 0.61 +0.8 598,607 - PP_0510 0.61 +0.6 598,607 - PP_0510 0.61 -0.1 598,607 - PP_0510 0.61 +0.1 598,607 - PP_0510 0.61 +0.3
Or see this region's nucleotide sequence