Strain Fitness in Escherichia coli BW25113 around b2912

Experiment: LB + ciprofloxacin Time24hr

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB + ciprofloxacin Time24hr
3,053,263	-	ygfB	b2909	0.65	+0.4
3,053,277	+	ygfB	b2909	0.67	-0.1
3,053,308	-	ygfB	b2909	0.73	-0.6
3,053,308	-	ygfB	b2909	0.73	+0.4
3,053,355	+	ygfB	b2909	0.81	-0.0
3,053,355	+	ygfB	b2909	0.81	+0.4
3,053,359	-	ygfB	b2909	0.81	+0.5
3,053,359	-	ygfB	b2909	0.81	-0.1
3,053,392	+	ygfB	b2909	0.87	+0.3
3,053,424	+				-0.1
3,053,434	+				-0.2
3,053,457	+				+0.3
3,053,457	+				-0.1
3,053,457	+				-0.1
3,053,457	+				+0.3
3,053,591	+				+0.4
3,053,591	+				+0.6
3,053,635	+				-0.9
3,053,635	+				-0.0
3,053,635	+				+0.4
3,053,679	+	zapA	b2910	0.14	-0.0
3,053,722	-	zapA	b2910	0.27	+0.2
3,053,731	+	zapA	b2910	0.29	-0.0
3,053,886	-	zapA	b2910	0.76	+0.0
3,053,886	-	zapA	b2910	0.76	+0.2
3,053,891	+	zapA	b2910	0.78	+0.3
3,053,992	-				-0.1
3,054,147	+	ssrS	b2911	0.78	+0.1
3,054,147	+	ssrS	b2911	0.78	-0.1
3,054,348	+	ygfA	b2912	0.15	-0.4
3,054,388	-	ygfA	b2912	0.23	-1.4
3,054,480	-	ygfA	b2912	0.40	-2.1
3,054,480	-	ygfA	b2912	0.40	-0.8
3,054,524	+	ygfA	b2912	0.48	-0.0
3,054,532	-	ygfA	b2912	0.49	+0.6
3,054,578	+	ygfA	b2912	0.57	+1.6
3,054,696	-	ygfA	b2912	0.79	-1.8
3,054,704	+	ygfA	b2912	0.80	-0.4
3,054,704	+	ygfA	b2912	0.80	-0.4
3,054,711	+	ygfA	b2912	0.82	+1.6
3,054,711	+	ygfA	b2912	0.82	-2.2
3,054,788	-				-0.8
3,054,897	+	rygC	b4446	0.19	-0.3
3,054,946	-				+0.0
3,054,946	-				+0.0
3,055,023	-				+0.6
3,055,023	-				+0.6
3,055,280	-				+0.1
3,055,352	+	serA	b2913	0.12	+1.2
3,055,352	+	serA	b2913	0.12	-0.4
3,055,437	-	serA	b2913	0.19	+0.1
3,055,535	-	serA	b2913	0.27	+0.2
3,055,611	+	serA	b2913	0.33	+0.3
3,055,611	+	serA	b2913	0.33	+0.7
3,055,642	-	serA	b2913	0.36	+0.7
3,055,674	-	serA	b2913	0.38	+0.1
3,055,678	+	serA	b2913	0.39	-0.2
3,055,678	+	serA	b2913	0.39	+0.6
3,055,678	+	serA	b2913	0.39	-0.1
3,055,708	+	serA	b2913	0.41	+0.4
3,055,745	+	serA	b2913	0.44	+0.5
3,055,745	+	serA	b2913	0.44	+0.7
3,055,749	-	serA	b2913	0.45	+0.3
3,055,749	-	serA	b2913	0.45	+0.1
3,055,802	-	serA	b2913	0.49	-0.1