Experiment: No phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0481 and PP_0482 are separated by 163 nucleotides PP_0482 and PP_0483 are separated by 72 nucleotides
PP_0481: PP_0481 - Catalase, at 564,521 to 565,960
_0481
PP_0482: PP_0482 - bacterioferritin, at 566,124 to 566,588
_0482
PP_0483: PP_0483 - excinuclease (uvrABC system protein A), at 566,661 to 569,495
_0483
Position (kb) 566
567 Strain fitness (log2 ratio) -1
0
1 at 565.220 kb on - strand, within PP_0481 at 565.232 kb on + strand, within PP_0481 at 565.427 kb on + strand, within PP_0481 at 565.468 kb on + strand, within PP_0481 at 565.468 kb on + strand, within PP_0481 at 565.469 kb on - strand, within PP_0481 at 565.469 kb on - strand, within PP_0481 at 565.469 kb on - strand, within PP_0481 at 565.518 kb on + strand, within PP_0481 at 565.519 kb on - strand, within PP_0481 at 565.526 kb on + strand, within PP_0481 at 565.607 kb on + strand, within PP_0481 at 565.607 kb on + strand, within PP_0481 at 565.608 kb on - strand, within PP_0481 at 565.640 kb on + strand, within PP_0481 at 565.641 kb on - strand, within PP_0481 at 565.641 kb on - strand, within PP_0481 at 565.641 kb on - strand, within PP_0481 at 565.641 kb on - strand, within PP_0481 at 565.645 kb on + strand, within PP_0481 at 565.673 kb on + strand, within PP_0481 at 565.762 kb on + strand, within PP_0481 at 565.769 kb on + strand, within PP_0481 at 565.770 kb on - strand, within PP_0481 at 565.834 kb on + strand at 565.834 kb on + strand at 565.887 kb on + strand at 565.887 kb on + strand at 565.887 kb on + strand at 565.892 kb on + strand at 565.892 kb on + strand at 565.893 kb on - strand at 565.917 kb on - strand at 566.010 kb on + strand at 566.011 kb on - strand at 566.066 kb on - strand at 566.066 kb on - strand at 566.086 kb on + strand at 566.086 kb on + strand at 566.086 kb on + strand at 566.086 kb on + strand at 566.087 kb on - strand at 566.095 kb on + strand at 566.095 kb on + strand at 566.096 kb on - strand at 566.143 kb on + strand at 566.144 kb on - strand at 566.144 kb on - strand at 566.144 kb on - strand at 566.144 kb on - strand at 566.151 kb on + strand at 566.151 kb on + strand at 566.152 kb on - strand at 566.152 kb on - strand at 566.196 kb on + strand, within PP_0482 at 566.196 kb on + strand, within PP_0482 at 566.196 kb on + strand, within PP_0482 at 566.217 kb on + strand, within PP_0482 at 566.218 kb on - strand, within PP_0482 at 566.218 kb on - strand, within PP_0482 at 566.244 kb on + strand, within PP_0482 at 566.360 kb on + strand, within PP_0482 at 566.361 kb on - strand, within PP_0482 at 566.403 kb on + strand, within PP_0482 at 566.403 kb on + strand, within PP_0482 at 566.404 kb on - strand, within PP_0482 at 566.404 kb on - strand, within PP_0482 at 566.460 kb on + strand, within PP_0482 at 566.460 kb on + strand, within PP_0482 at 566.460 kb on + strand, within PP_0482 at 566.460 kb on + strand, within PP_0482 at 566.460 kb on + strand, within PP_0482 at 566.461 kb on - strand, within PP_0482 at 566.461 kb on - strand, within PP_0482 at 566.461 kb on - strand, within PP_0482 at 566.517 kb on + strand, within PP_0482 at 566.518 kb on - strand, within PP_0482 at 566.518 kb on - strand, within PP_0482 at 566.586 kb on + strand at 566.586 kb on + strand at 566.586 kb on + strand at 566.586 kb on + strand at 566.587 kb on - strand at 566.587 kb on - strand at 566.587 kb on - strand at 566.587 kb on - strand at 566.587 kb on - strand at 566.587 kb on - strand at 566.607 kb on + strand at 566.630 kb on - strand at 566.659 kb on - strand at 567.220 kb on + strand, within PP_0483
Per-strain Table
Position Strand Gene LocusTag Fraction No phage control remove 565,220 - PP_0481 0.49 +0.8 565,232 + PP_0481 0.49 +0.2 565,427 + PP_0481 0.63 +0.3 565,468 + PP_0481 0.66 -1.0 565,468 + PP_0481 0.66 +0.7 565,469 - PP_0481 0.66 -0.0 565,469 - PP_0481 0.66 +0.5 565,469 - PP_0481 0.66 +0.1 565,518 + PP_0481 0.69 -0.1 565,519 - PP_0481 0.69 -0.1 565,526 + PP_0481 0.70 -0.1 565,607 + PP_0481 0.75 +1.0 565,607 + PP_0481 0.75 +0.9 565,608 - PP_0481 0.75 +0.4 565,640 + PP_0481 0.78 -0.3 565,641 - PP_0481 0.78 -0.2 565,641 - PP_0481 0.78 +0.4 565,641 - PP_0481 0.78 -0.5 565,641 - PP_0481 0.78 +0.6 565,645 + PP_0481 0.78 -0.3 565,673 + PP_0481 0.80 -0.2 565,762 + PP_0481 0.86 +0.4 565,769 + PP_0481 0.87 +0.1 565,770 - PP_0481 0.87 +0.7 565,834 + +0.5 565,834 + -0.3 565,887 + +0.5 565,887 + +1.0 565,887 + +1.3 565,892 + -0.2 565,892 + +0.8 565,893 - +0.1 565,917 - -0.0 566,010 + +0.6 566,011 - +1.2 566,066 - -0.1 566,066 - -0.2 566,086 + +1.4 566,086 + -0.1 566,086 + +0.0 566,086 + +0.0 566,087 - +0.1 566,095 + +0.3 566,095 + +0.5 566,096 - +0.1 566,143 + +0.1 566,144 - +0.9 566,144 - -0.1 566,144 - +0.3 566,144 - -0.3 566,151 + -0.1 566,151 + -0.3 566,152 - +0.1 566,152 - +0.8 566,196 + PP_0482 0.15 +0.2 566,196 + PP_0482 0.15 -0.3 566,196 + PP_0482 0.15 +0.6 566,217 + PP_0482 0.20 +1.4 566,218 - PP_0482 0.20 -0.0 566,218 - PP_0482 0.20 +0.7 566,244 + PP_0482 0.26 +0.8 566,360 + PP_0482 0.51 +1.6 566,361 - PP_0482 0.51 +0.3 566,403 + PP_0482 0.60 +0.5 566,403 + PP_0482 0.60 -0.8 566,404 - PP_0482 0.60 +0.7 566,404 - PP_0482 0.60 -0.2 566,460 + PP_0482 0.72 +0.3 566,460 + PP_0482 0.72 +0.0 566,460 + PP_0482 0.72 -0.2 566,460 + PP_0482 0.72 +0.4 566,460 + PP_0482 0.72 -0.2 566,461 - PP_0482 0.72 +1.0 566,461 - PP_0482 0.72 +0.2 566,461 - PP_0482 0.72 +0.5 566,517 + PP_0482 0.85 -0.1 566,518 - PP_0482 0.85 +0.0 566,518 - PP_0482 0.85 +0.4 566,586 + +0.8 566,586 + +1.2 566,586 + -0.1 566,586 + +0.2 566,587 - +0.0 566,587 - +1.2 566,587 - +0.1 566,587 - +0.5 566,587 - -0.1 566,587 - -0.5 566,607 + -0.3 566,630 - -0.0 566,659 - -0.6 567,220 + PP_0483 0.20 +0.9
Or see this region's nucleotide sequence